RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
GCN1-208ENST00000551549 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 GRXCR1A8MXD5 290 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 GCOM1H8Y6P7 765 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 RGS20O76081 388 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 MMP3P08254 477 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 POLR2MP0CAP2 368 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 MCM5P33992 734 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 BMP2KLQ5H9B9 411 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 KAT2BQ92831 832 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
GCN1-208ENST00000551549 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
GCN1-208ENST00000551549 REV3LO60673 3130 aa11.27□□□□□ -0.6
GCN1-208ENST00000551549 SORBS3O60504 671 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 DDAH1O94760 285 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 FGBP02675 491 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 SUPT20HL2P0C7V6 817 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 RXRAP19793 462 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 DNAJB2P25686 324 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 PBX2P40425 430 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 PGM5Q15124 567 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 NECTIN1Q15223 517 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 OTOP2Q7RTS6 562 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 VSIG10LQ86VR7 867 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 RAB11FIP4Q86YS3 637 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
GCN1-208ENST00000551549 SRBD1Q8N5C6 995 aaKnown RBP11.27□□□□□ -0.61
GCN1-208ENST00000551549 CTCFLQ8NI51 663 aaPredicted RBP11.27□□□□□ -0.61
GCN1-208ENST00000551549 HERVK_113Q902F9 699 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
GCN1-208ENST00000551549 TIFAQ96CG3 184 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 MAP3K14Q99558 947 aa11.27□□□□□ -0.61
GCN1-208ENST00000551549 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
GCN1-208ENST00000551549 TRANK1O15050 2925 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 TTC28Q96AY4 2481 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 CASTP20810 708 aaKnown RBP11.26□□□□□ -0.61
GCN1-208ENST00000551549 CCND2P30279 289 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 SP2Q02086 613 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 TRAF1Q13077 416 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 LAMC2Q13753 1193 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 GRIN2CQ14957 1233 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 DGKDQ16760 1214 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
GCN1-208ENST00000551549 SAMD3Q8N6K7 520 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 MYLIPQ8WY64 445 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
GCN1-208ENST00000551549 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
GCN1-208ENST00000551549 TMEM87BQ96K49 555 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 SPZ1Q9BXG8 430 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
GCN1-208ENST00000551549 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 TMEM265A0A087WTH1 108 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 ZNF286BP0CG31 522 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 KIF5BP33176 963 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 LIFRP42702 1097 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 PSEN2P49810 448 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 PTPN11Q06124 597 aaPredicted RBP11.25□□□□□ -0.61
GCN1-208ENST00000551549 PTGISQ16647 500 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 CELF3Q5SZQ8 465 aaKnown RBP11.25□□□□□ -0.61
GCN1-208ENST00000551549 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 GDF6Q6KF10 455 aaPredicted RBP11.25□□□□□ -0.61
GCN1-208ENST00000551549 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
GCN1-208ENST00000551549 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
GCN1-208ENST00000551549 RBAK-RBAKDNI3L0D1 243 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 GGPS1O95749 300 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 FOSL2P15408 326 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 UBA1P22314 1058 aaKnown RBP11.24□□□□□ -0.61
GCN1-208ENST00000551549 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 GNAQP50148 359 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 MRPS9P82933 396 aaKnown RBP11.24□□□□□ -0.61
GCN1-208ENST00000551549 MFSD10Q14728 455 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 HSDL1Q3SXM5 330 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 USP17L6PQ6QN14 398 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms