RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MEFVO15553 781 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 STRN3Q13033 797 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 GRM1Q13255 1194 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 MESDQ14696 234 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 GLI2P10070 1586 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 SERPING1P05155 500 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 HARSP12081 509 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 PDE6CP51160 858 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 IRX2Q9BZI1 471 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-212ENST00000550418 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.34
RBFOX1-212ENST00000550418 BACH1O14867 736 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 MAN1A1P33908 653 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 NBPF10Q6P3W6 841 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 NYAP1Q6ZVC0 841 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 RSAD2Q8WXG1 361 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 PABPN1LA6NDY0 278 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 GNPATO15228 680 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 ADORA1P30542 326 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 ADCY2Q08462 1091 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 CASC4Q6P4E1 433 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 TEX33O43247 280 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 THEGQ9P2T0 379 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 HDAC6Q9UBN7 1215 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 ZNF148Q9UQR1 794 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 TARSL2A2RTX5 802 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 AFAP1L2Q8N4X5 818 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 SPDL1Q96EA4 605 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 RAB20Q9NX57 234 aa17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-212ENST00000550418 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 LIFRP42702 1097 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 MAP3K7O43318 606 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 NR2F2P24468 414 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 SLC1A4P43007 532 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 MIER3Q7Z3K6 550 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 MTF1Q14872 753 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 DPF2Q92785 391 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 PUS3Q9BZE2 481 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 TUBB6Q9BUF5 446 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 PRDM4Q9UKN5 801 aa17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.19■□□□□ 0.34
RBFOX1-212ENST00000550418 ECEL1O95672 775 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 ATF7P17544 494 aaPredicted RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 DR1Q01658 176 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 SART1O43290 800 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 CIAO1O76071 339 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 SP4Q02446 784 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 RCN2Q14257 317 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 LRRC41Q15345 812 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 ZNF449Q6P9G9 518 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 TPH2Q8IWU9 490 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 ZNF579Q8NAF0 562 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 ATP6V1G3Q96LB4 118 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 MAGOHP61326 146 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 PPP2R2AP63151 447 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 DBN1Q16643 649 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 CAPRIN2Q6IMN6 1127 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 CYP4F22Q6NT55 531 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 GDAP1Q8TB36 358 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 GJA10Q969M2 543 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 SUFUQ9UMX1 484 aa17.18■□□□□ 0.34
RBFOX1-212ENST00000550418 ZNF354CQ86Y25 554 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 TBK1Q9UHD2 729 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 PPP1R37O75864 691 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 CTSWP56202 376 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 STK10O94804 968 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 ESYT3A0FGR9 886 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 CD19P15391 556 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 PHKA1P46020 1223 aa17.17■□□□□ 0.34
RBFOX1-212ENST00000550418 TMED2Q15363 201 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms