RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
UBC-214ENST00000546271 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
UBC-214ENST00000546271 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
UBC-214ENST00000546271 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 A6NJR5 290 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
UBC-214ENST00000546271 EPHB4P54760 987 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 PSMC6P62333 389 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 PURAQ00577 322 aaKnown RBP13.81□□□□□ -0.2
UBC-214ENST00000546271 ITGA7Q13683 1181 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 RTN1Q16799 776 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 SZT2Q5T011 3432 aa13.81□□□□□ -0.2
UBC-214ENST00000546271 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 RGS20O76081 388 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 GH1P01241 217 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 CD4P01730 458 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 MYL3P08590 195 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 CCND2P30279 289 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 RCAN1P53805 252 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 FGD1P98174 961 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 ARHGAP1Q07960 439 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
UBC-214ENST00000546271 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 Q6ZUG5 572 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 USP26Q9BXU7 913 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
UBC-214ENST00000546271 DDX41Q9UJV9 622 aaKnown RBP13.8□□□□□ -0.2
UBC-214ENST00000546271 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 FRMPD4Q14CM0 1322 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
UBC-214ENST00000546271 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 MEIS2O14770 477 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 KPNA6O60684 536 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 TIMP1P01033 207 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
UBC-214ENST00000546271 PSMA5P28066 241 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 CDC27P30260 824 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 FUT2Q10981 343 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 SMARCC2Q8TAQ2 1214 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 AFG1LQ8WV93 481 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 BRF1Q92994 677 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 CUL5Q93034 780 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
UBC-214ENST00000546271 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
UBC-214ENST00000546271 AGXT2Q9BYV1 514 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 MTMR10Q9NXD2 777 aa13.79□□□□□ -0.2
UBC-214ENST00000546271 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
UBC-214ENST00000546271 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 MMP3P08254 477 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBC-214ENST00000546271 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
UBC-214ENST00000546271 EMID1Q96A84 441 aaPredicted RBP13.78□□□□□ -0.2
UBC-214ENST00000546271 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
UBC-214ENST00000546271 LAMA3Q16787 3333 aa13.77□□□□□ -0.2
UBC-214ENST00000546271 B4GALT4O60513 344 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 STAM2O75886 525 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 TGFB3P10600 412 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 CYP2C18P33260 490 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
UBC-214ENST00000546271 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.216e-7■□□□□ 10.6
UBC-214ENST00000546271 CHMP4BP1P59074 171 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
UBC-214ENST00000546271 LAMC2Q13753 1193 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 MFSD5Q6N075 450 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 TRPV6Q9H1D0 765 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 ZSWIM6Q9HCJ5 1215 aa13.77□□□□□ -0.21
UBC-214ENST00000546271 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
UBC-214ENST00000546271 SCN5AQ14524 2016 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 NID2Q14112 1375 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 CCDC196A0A1B0GTZ2 297 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 CSF2RAP15509 400 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 SP2Q02086 613 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 UBE2SQ16763 222 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 NBPF20Q3BBV1 942 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
UBC-214ENST00000546271 DHX37Q8IY37 1157 aaKnown RBP13.76□□□□□ -0.21
UBC-214ENST00000546271 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
UBC-214ENST00000546271 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
UBC-214ENST00000546271 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms