RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 RAB33AQ14088 237 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
RAP1B-230ENST00000543697 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
RAP1B-230ENST00000543697 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
RAP1B-230ENST00000543697 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
RAP1B-230ENST00000543697 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 RAD18Q9NS91 495 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 GMIPQ9P107 970 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 TMA7Q9Y2S6 64 aaKnown RBP9.35□□□□□ -0.91
RAP1B-230ENST00000543697 PCDHB14Q9Y5E9 798 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 ABCC12Q96J65 1359 aa9.35□□□□□ -0.91
RAP1B-230ENST00000543697 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 IPO8O15397 1037 aaKnown RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ZNF862O60290 1169 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 BCAR3O75815 825 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 IGKV5-2P06315 115 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 HOXB4P17483 251 aaPredicted RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ID3Q02535 119 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 HGSNATQ68CP4 663 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 GK5Q6ZS86 529 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 PLPPR2Q96GM1 343 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 API5Q9BZZ5 524 aaKnown RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 PRO3102Q9H379 93 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 ATXN3LQ9H3M9 355 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
RAP1B-230ENST00000543697 PPT2Q9UMR5 302 aa9.34□□□□□ -0.91
RAP1B-230ENST00000543697 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.92
RAP1B-230ENST00000543697 IRS4O14654 1257 aaPredicted RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 HTR3BO95264 441 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 PCCAP05165 728 aaPredicted RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 NPR1P16066 1061 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 CCNFP41002 786 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 SERINC3Q13530 473 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 CCDC144BQ3MJ40 725 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 SMG8Q8ND04 991 aaKnown RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 MASTLQ96GX5 879 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 RBM17Q96I25 401 aaKnown RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 WDR18Q9BV38 432 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 RUSC1Q9BVN2 902 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
RAP1B-230ENST00000543697 DDX60Q8IY21 1712 aaKnown RBP9.33□□□□□ -0.92
RAP1B-230ENST00000543697 LAMB2P55268 1798 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 FAM155AB1AL88 458 aaPredicted RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 KLF4O43474 513 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 WIPF1O43516 503 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ADAM11O75078 769 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ETFBP38117 255 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 RING1Q06587 406 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 GCKRQ14397 625 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 BEND3Q5T5X7 828 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 FBXW10Q5XX13 1052 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ZKSCAN2Q63HK3 967 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ANKRD34AQ69YU3 496 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 FBXO46Q6PJ61 603 aaPredicted RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 LRFN4Q6PJG9 635 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 LINC00114Q6XXX2 140 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 UBE3BQ7Z3V4 1068 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 FTSJ3Q8IY81 847 aaKnown RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 MRFAP1L1Q96HT8 127 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 NACC1Q96RE7 527 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 TMX4Q9H1E5 349 aaPredicted RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 ACTR10Q9NZ32 417 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 RCAN3Q9UKA8 241 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
RAP1B-230ENST00000543697 MYH3P11055 1940 aa9.32□□□□□ -0.92
RAP1B-230ENST00000543697 PDE8AO60658 829 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 ALDH1L1O75891 902 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 SRGNP10124 158 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 LIG1P18858 919 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 CCT4P50991 539 aaKnown RBP9.31□□□□□ -0.92
RAP1B-230ENST00000543697 YARSP54577 528 aaKnown RBP9.31□□□□□ -0.92
RAP1B-230ENST00000543697 CLCQ05315 142 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 FXNQ16595 210 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 STYK1Q6J9G0 422 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 DDX46Q7L014 1031 aaKnown RBP9.31□□□□□ -0.92
RAP1B-230ENST00000543697 PLVAPQ9BX97 442 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 WNT10AQ9GZT5 417 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 STXBP5LQ9Y2K9 1186 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 RIC1Q4ADV7 1423 aa9.31□□□□□ -0.92
RAP1B-230ENST00000543697 GRM8O00222 908 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms