RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 RSRC2Q7L4I2 434 aaKnown RBP16.46■□□□□ 0.23
DDX55-209ENST00000542286 DDX12PQ92771 950 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 ARFGAP3Q9NP61 516 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 DDX25Q9UHL0 483 aaKnown RBP16.46■□□□□ 0.23
DDX55-209ENST00000542286 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 QRICH1Q2TAL8 776 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 OR8K1Q8NGG5 319 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
DDX55-209ENST00000542286 AK8Q96MA6 479 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
DDX55-209ENST00000542286 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 APBA3O96018 575 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 SRLQ86TD4 932 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
DDX55-209ENST00000542286 PNKPQ96T60 521 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 THAP9Q9H5L6 903 aa16.45■□□□□ 0.22
DDX55-209ENST00000542286 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 EEF1GP26641 437 aaKnown RBP16.44■□□□□ 0.22
DDX55-209ENST00000542286 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 EXOC4Q96A65 974 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 LTBP1Q14766 1721 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 POTEB3A0JP26 581 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 POTECB2RU33 542 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 POTEBQ6S5H4 581 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 NOA1Q8NC60 698 aaKnown RBP16.44■□□□□ 0.22
DDX55-209ENST00000542286 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
DDX55-209ENST00000542286 CAPZA3Q96KX2 299 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 FUT8Q9BYC5 575 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 ZHX3Q9H4I2 956 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 TDRD3Q9H7E2 651 aaKnown RBP16.44■□□□□ 0.22
DDX55-209ENST00000542286 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
DDX55-209ENST00000542286 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
DDX55-209ENST00000542286 CTAGE9A4FU28 777 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 MEIS1O00470 390 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 NPR1P16066 1061 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 SLC1A4P43007 532 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
DDX55-209ENST00000542286 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
DDX55-209ENST00000542286 SIAH1Q8IUQ4 282 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 RIC8AQ9NPQ8 531 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 FAM170AA1A519 330 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 ZBTB5O15062 677 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 FECHP22830 423 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 AOC3Q16853 763 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 RAD54LQ92698 747 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 KIAA1024Q9UPX6 916 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 SCN9AQ15858 1988 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
DDX55-209ENST00000542286 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 KRT79Q5XKE5 535 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 CUL5Q93034 780 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 DRC1Q96MC2 740 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 TTYH3Q9C0H2 523 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 MMRN2Q9H8L6 949 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 ANKZF1Q9H8Y5 726 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 PSD3Q9NYI0 1048 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 CDC23Q9UJX2 597 aa16.43■□□□□ 0.22
DDX55-209ENST00000542286 ATP1A1P05023 1023 aaKnown RBP16.42■□□□□ 0.22
DDX55-209ENST00000542286 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
DDX55-209ENST00000542286 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 CYP2W1Q8TAV3 490 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 GOLGA1Q92805 767 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 ZNF263O14978 683 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 ACTN2P35609 894 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 DNM2P50570 870 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 MRPS25P82663 173 aaKnown RBP16.42■□□□□ 0.22
DDX55-209ENST00000542286 CDC37Q16543 378 aaPredicted RBP16.42■□□□□ 0.22
DDX55-209ENST00000542286 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 CRACR2AQ9BSW2 395 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 NHEJ1Q9H9Q4 299 aaPredicted RBP16.42■□□□□ 0.22
DDX55-209ENST00000542286 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 PLIN4Q96Q06 1357 aa16.42■□□□□ 0.22
DDX55-209ENST00000542286 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 H3BQF6 201 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 ZNF185O15231 689 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 ECE2O60344 883 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
DDX55-209ENST00000542286 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
DDX55-209ENST00000542286 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
DDX55-209ENST00000542286 CNNM4Q6P4Q7 775 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 NAPGQ99747 312 aaPredicted RBP16.41■□□□□ 0.22
DDX55-209ENST00000542286 PCNTO95613 3336 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms