RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 POLR2MP0CAP2 368 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 KIF5BP33176 963 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 LIFRP42702 1097 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 CCL23P55773 120 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 PGM5Q15124 567 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
RAB40B-202ENST00000538809 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
RAB40B-202ENST00000538809 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 SORBS3O60504 671 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
RAB40B-202ENST00000538809 NEFLP07196 543 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 CYP2C9P11712 490 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 TRAF1Q13077 416 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
RAB40B-202ENST00000538809 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 SEZ6LQ9BYH1 1024 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 WNT8AQ9H1J5 351 aa17.31■□□□□ 0.36
RAB40B-202ENST00000538809 MAP3K20Q9NYL2 800 aaKnown RBP17.31■□□□□ 0.36
RAB40B-202ENST00000538809 RGS20O76081 388 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
RAB40B-202ENST00000538809 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 FAM109BQ6ICB4 259 aaPredicted RBP17.3■□□□□ 0.36
RAB40B-202ENST00000538809 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 MICU3Q86XE3 530 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
RAB40B-202ENST00000538809 SAMD3Q8N6K7 520 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 KCNB2Q92953 911 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 GUCD1Q96NT3 240 aa17.3■□□□□ 0.36
RAB40B-202ENST00000538809 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
RAB40B-202ENST00000538809 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
RAB40B-202ENST00000538809 hCG_1642624A0A1W2PR95 340 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 KPNA6O60684 536 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 SMARCA1P28370 1054 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 CCND2P30279 289 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
RAB40B-202ENST00000538809 ADCK5Q3MIX3 580 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 PSRC1Q6PGN9 363 aaPredicted RBP17.29■□□□□ 0.36
RAB40B-202ENST00000538809 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RAB40B-202ENST00000538809 SCLYQ96I15 445 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 IL23AQ9NPF7 189 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
RAB40B-202ENST00000538809 FRMPD4Q14CM0 1322 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 CALM1P0DP23 149 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 CALM2P0DP24 149 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 CALM3P0DP25 149 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 GNAQP50148 359 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 VSIG10LQ86VR7 867 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 NEK1Q96PY6 1258 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 CDH23Q9H251 3354 aa17.28■□□□□ 0.36
RAB40B-202ENST00000538809 SUPT20HL2P0C7V6 817 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 UBA1P22314 1058 aaKnown RBP17.27■□□□□ 0.36
RAB40B-202ENST00000538809 USP17L6PQ6QN14 398 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
RAB40B-202ENST00000538809 SMARCC2Q8TAQ2 1214 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 KAT2BQ92831 832 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 TTYH1Q9H313 450 aaPredicted RBP17.27■□□□□ 0.36
RAB40B-202ENST00000538809 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
RAB40B-202ENST00000538809 GRXCR1A8MXD5 290 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 GGPS1O95749 300 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 CASTP20810 708 aaKnown RBP17.26■□□□□ 0.35
RAB40B-202ENST00000538809 DGKDQ16760 1214 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 RASIP1Q5U651 963 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 OTOP2Q7RTS6 562 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 PPTC7Q8NI37 304 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-202ENST00000538809 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
RAB40B-202ENST00000538809 CXXC1Q9P0U4 656 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-202ENST00000538809 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 DNAJB2P25686 324 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 HSPA4P34932 840 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 PSEN2P49810 448 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 MRPS9P82933 396 aaKnown RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 SP2Q02086 613 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 PTPN11Q06124 597 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 KRT32Q14532 448 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 CELF3Q5SZQ8 465 aaKnown RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 GDF6Q6KF10 455 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 DHX32Q7L7V1 743 aaKnown RBP17.25■□□□□ 0.35
RAB40B-202ENST00000538809 CUL5Q93034 780 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms