RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 HSPD1P10809 573 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 CKBP12277 381 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 MFSD6Q6ZSS7 791 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 C7orf31Q8N865 590 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 TAAR1Q96RJ0 339 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 SUGCTQ9HAC7 445 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 C11orf16Q9NQ32 467 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
SMARCA4-206ENST00000538456 MUC6Q6W4X9 2439 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 GJB5O95377 273 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 DGKDQ16760 1214 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 ANKRD45Q5TZF3 282 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 SYTL5Q8TDW5 730 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 NSUN6Q8TEA1 469 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 TTC14Q96N46 770 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 RAD9AQ99638 391 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 CD320Q9NPF0 282 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 NEDD4P46934 1319 aa16.4■□□□□ 0.22
SMARCA4-206ENST00000538456 ABHD14A-ACY1A0A1B0GW23 586 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 LINC01553A4QN01 128 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 CXCL10P02778 98 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 EIF2AK2P19525 551 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 PSEN2P49810 448 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 RBL2Q08999 1139 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 NMIQ13287 307 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 STXBP2Q15833 593 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 RMDN3Q96TC7 470 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 UBE2ZQ9H832 354 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 LMCD1Q9NZU5 365 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 ABCB11O95342 1321 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
SMARCA4-206ENST00000538456 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 KCNA5P22460 613 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 ERVK-21P61565 698 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 IKBKEQ14164 716 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 MFSD10Q14728 455 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 KIAA0753Q2KHM9 967 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 ARHGEF16Q5VV41 709 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 WNT8BQ93098 351 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 ARIH1Q9Y4X5 557 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
SMARCA4-206ENST00000538456 SORBS3O60504 671 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 GPR37L1O60883 481 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 PCP11498 1178 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 PDE1AP54750 535 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 ZNF200P98182 395 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 PTK7Q13308 1070 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 MBTPS1Q14703 1052 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 ESR2Q92731 530 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-206ENST00000538456 EFCAB14O75071 495 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 F2P00734 622 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 TRAF7Q6Q0C0 670 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 MCF2L2Q86YR7 1114 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 PPTC7Q8NI37 304 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 VAT1LQ9HCJ6 419 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 PIEZO1Q92508 2521 aa16.36■□□□□ 0.21
SMARCA4-206ENST00000538456 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 PI4K2BG5E9Z4 385 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 KDM4AO75164 1064 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 LGR5O75473 907 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 CFBP00751 764 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 SSTR3P32745 418 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 LAMC2Q13753 1193 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 TRIM71Q2Q1W2 868 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 FBXO11Q86XK2 927 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 DGKHQ86XP1 1220 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 MYOCDQ8IZQ8 938 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 GJD3Q8N144 294 aa16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-206ENST00000538456 PXMP2Q9NR77 195 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms