RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 RASSF8Q8NHQ8 419 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 KLHDC4Q8TBB5 520 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 CPLX3Q8WVH0 158 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 TAF4BQ92750 862 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 DDX12PQ92771 950 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 OTUD5Q96G74 571 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 CLIC6Q96NY7 704 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 PURBQ96QR8 312 aaKnown RBP6.44□□□□□ -1.38
CHD4-206ENST00000536999 CSRNP1Q96S65 589 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 TSG101Q99816 390 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 DESI2Q9BSY9 194 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 PHF20Q9BVI0 1012 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 RIC8AQ9NPQ8 531 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 PLCB1Q9NQ66 1216 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 PRDM6Q9NQX0 595 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 CNNM1Q9NRU3 951 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 BMP2KQ9NSY1 1161 aaPredicted RBP6.44□□□□□ -1.38
CHD4-206ENST00000536999 ZSWIM5Q9P217 1185 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 PLAGL2Q9UPG8 496 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 COL11A2P13942 1736 aaPredicted RBP6.44□□□□□ -1.38
CHD4-206ENST00000536999 BRCA2P51587 3418 aa6.44□□□□□ -1.38
CHD4-206ENST00000536999 RANBP2P49792 3224 aaKnown RBP6.44□□□□□ -1.38
CHD4-206ENST00000536999 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 AKAP11Q9UKA4 1901 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 PVALEFA0A1B0GWK0 134 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CFAP73A6NFT4 308 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 VGLL3A8MV65 326 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 BTNL10A8MVZ5 291 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 B4E1Z4 1266 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 GCOM1H8Y6P7 765 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 TRIM66O15016 1216 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 FOXP2O15409 715 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 PJA2O43164 708 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 AKR1B10O60218 316 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 PPP1R37O75864 691 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 MYZAPP0CAP1 466 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CHRM1P11229 460 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 PDE6AP16499 860 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CCNE1P24864 410 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 HNRNPH1P31943 449 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 ZAP70P43403 619 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CCT5P48643 541 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SLC8A3P57103 927 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 PDE4BQ07343 736 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CRYMQ14894 314 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 ZKSCAN8Q15776 578 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 CCDC96Q2M329 555 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SLC9C1Q4G0N8 1177 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CCDC38Q502W7 563 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 IFIT1BQ5T764 474 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 OTUD7BQ6GQQ9 843 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 GIGYF2Q6Y7W6 1299 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 PACS2Q86VP3 889 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 HOOK3Q86VS8 718 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 ZSCAN29Q8IWY8 852 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 ZNF654Q8IZM8 581 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SYCE1Q8N0S2 351 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 KCTD17Q8N5Z5 321 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CNBD1Q8NA66 436 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 SPATA4Q8NEY3 305 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CCDC26Q8TAB7 109 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SYMPKQ92797 1274 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 PHKBQ93100 1093 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 VTI1AQ96AJ9 217 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 CENPTQ96BT3 561 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 RSRC1Q96IZ7 334 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 PBKQ96KB5 322 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 TRIM47Q96LD4 638 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 PCMTD1Q96MG8 357 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 RUNDC3BQ96NL0 473 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 TRERF1Q96PN7 1200 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SLF1Q9BQI6 1058 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 TUBGCP2Q9BSJ2 902 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 IFIH1Q9BYX4 1025 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 PUS7LQ9H0K6 701 aaKnown RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 CXorf56Q9H5V9 222 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 NHEJ1Q9H9Q4 299 aaPredicted RBP6.43□□□□□ -1.38
CHD4-206ENST00000536999 VEZTQ9HBM0 779 aa6.43□□□□□ -1.38
CHD4-206ENST00000536999 SCN11AQ9UI33 1791 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 TTC26A0AVF1 554 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 ERVV-1B6SEH8 477 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 ATP5J2-PTCD1G3V325 749 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 hCG_1984214I3L0E3 225 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 RGL2O15211 777 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 TEX33O43247 280 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 PDE8AO60658 829 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 PHACTR2O75167 634 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 IDH1O75874 414 aaKnown RBP6.42□□□□□ -1.38
CHD4-206ENST00000536999 GFPT2O94808 682 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 GSTA1P08263 222 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 SLC10A3P09131 477 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 EN2P19622 333 aaPredicted RBP6.42□□□□□ -1.38
CHD4-206ENST00000536999 SMARCA1P28370 1054 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 GNA11P29992 359 aa6.42□□□□□ -1.38
CHD4-206ENST00000536999 ATP5DP30049 168 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms