RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 FOSBP53539 338 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 TMEM132BQ14DG7 1078 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
NR1H3-231ENST00000529540 PTPN18Q99952 460 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
NR1H3-231ENST00000529540 PIK3CDO00329 1044 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 CCP110O43303 1012 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 NRDCO43847 1150 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 FOSP01100 380 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ALAS1P13196 640 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 SNAP25P60880 206 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 AP3B2Q13367 1082 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 PLS1Q14651 629 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 E4F1Q66K89 784 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ZNF771Q7L3S4 317 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 AGBL1Q96MI9 1066 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 IKBKBO14920 756 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 H2AFXP16104 143 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 NDUFA8P51970 172 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 GRM1Q13255 1194 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 STK38Q15208 465 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 TERF2Q15554 542 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ELF2Q15723 593 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 FAM110CQ1W6H9 321 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 KRT25Q7Z3Z0 450 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 NOSTRINQ8IVI9 506 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 TRERF1Q96PN7 1200 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 MROH8Q9H579 483 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
NR1H3-231ENST00000529540 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 GCOM1H8Y6P7 765 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-231ENST00000529540 IGF2BP3O00425 579 aaKnown RBP eCLIP16.42■□□□□ 0.22
NR1H3-231ENST00000529540 POLR2MP0CAP2 368 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 CYP2C8P10632 490 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 ERVK-9P63128 1117 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 ERVK-24P63145 666 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 GHRHRQ02643 423 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
NR1H3-231ENST00000529540 DPCR1Q3MIW9 517 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 PAGR1Q9BTK6 254 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
NR1H3-231ENST00000529540 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
NR1H3-231ENST00000529540 A0A087WWV3 80 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 SPTLC2O15270 562 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 SFPQP23246 707 aaKnown RBP eCLIP16.41■□□□□ 0.22
NR1H3-231ENST00000529540 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 NCAPHQ15003 741 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 NPY5RQ15761 445 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
NR1H3-231ENST00000529540 TMC6Q7Z403 805 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 IFNKQ9P0W0 207 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 RBPJLQ9UBG7 517 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 PFASO15067 1338 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
NR1H3-231ENST00000529540 A0A1B0GVL5 298 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 M0R2N6 131 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 CMA1P23946 247 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
NR1H3-231ENST00000529540 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 CLIC4Q9Y696 253 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 CA12O43570 354 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 TLR2O60603 784 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 SMC2O95347 1197 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 CFBP00751 764 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 HSPA6P17066 643 aa16.4■□□□□ 0.22
NR1H3-231ENST00000529540 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
NR1H3-231ENST00000529540 NAP1L4Q99733 375 aaKnown RBP16.4■□□□□ 0.22
NR1H3-231ENST00000529540 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
NR1H3-231ENST00000529540 FAM237AA0A1B0GTK4 181 aa16.39■□□□□ 0.21
NR1H3-231ENST00000529540 MEIS2O14770 477 aa16.39■□□□□ 0.21
NR1H3-231ENST00000529540 CNMDO75829 334 aa16.39■□□□□ 0.21
NR1H3-231ENST00000529540 HSD17B4P51659 736 aa16.39■□□□□ 0.21
NR1H3-231ENST00000529540 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
NR1H3-231ENST00000529540 NONOQ15233 471 aaKnown RBP eCLIP16.39■□□□□ 0.21
NR1H3-231ENST00000529540 AXDND1Q5T1B0 1012 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-231ENST00000529540 RNF207Q6ZRF8 634 aa16.39■□□□□ 0.21
NR1H3-231ENST00000529540 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms