RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RALBP1Q15311 655 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 AAK1Q2M2I8 961 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 CCDC181Q5TID7 509 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 ANKRD23Q86SG2 305 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 CCNJLQ8IV13 435 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 CARD11Q9BXL7 1154 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 BCO2Q9BYV7 579 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 EHD4Q9H223 541 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 LIN7BQ9HAP6 207 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 LATS2Q9NRM7 1088 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 FAM8A1Q9UBU6 413 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 CLSPNQ9HAW4 1339 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 SMNDC1O75940 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 UFL1O94874 794 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 MAP4K4O95819 1239 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 XRCC5P13010 732 aaKnown RBP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 CPB1P15086 417 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 MCCP23508 829 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 RTP1P59025 263 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 RASA3Q14644 834 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 SUPT20HL1Q3ZLR7 823 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 PERM1Q5SV97 790 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 ELMSAN1Q6PJG2 1045 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 PPP1R42Q7Z4L9 355 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 KIAA0825Q8IV33 1275 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 GLIS3Q8NEA6 775 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 TRIB2Q92519 343 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 NXPE3Q969Y0 559 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 TCF12Q99081 682 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 LPIN3Q9BQK8 851 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 UTP14AQ9BVJ6 771 aaKnown RBP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 OSBPL7Q9BZF2 842 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 RASSF4Q9H2L5 321 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 ZFYVE1Q9HBF4 777 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 RNF19AQ9NV58 838 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 GJD2Q9UKL4 321 aa6.48□□□□□ -1.37
PABPC1-223ENST00000523636 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.48□□□□□ -1.37
PABPC1-223ENST00000523636 CEP295Q9C0D2 2601 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 PDE2AO00408 941 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 HMOX1P09601 288 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 SNRPA1P09661 255 aaKnown RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 GSTT1P30711 240 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 KRT40Q6A162 431 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 FAM43BQ6ZT52 329 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 FAM178BQ8IXR5 827 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 MICALL1Q8N3F8 863 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 GALNT6Q8NCL4 622 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 ZKSCAN4Q969J2 545 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 PRMT6Q96LA8 375 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 SENP6Q9GZR1 1112 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 METTL14Q9HCE5 456 aaKnown RBP6.47□□□□□ -1.37
PABPC1-223ENST00000523636 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
PABPC1-223ENST00000523636 TMEM238LA0A1B0GVL6 79 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 TNPO2O14787 897 aaKnown RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 CELA2BP08218 269 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 ACPPP15309 386 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 CCND3P30281 292 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 ATP11AP98196 1134 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 TEFQ10587 303 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 PPIL2Q13356 520 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 PARP10Q53GL7 1025 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 RASIP1Q5U651 963 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 PSAPL1Q6NUJ1 521 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 NXPE4Q6UWF7 544 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 C20orf204Q6ZNR8 217 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 NOP9Q86U38 636 aaKnown RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 ERO1BQ86YB8 467 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 NME8Q8N427 588 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 CERS5Q8N5B7 392 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 EVI5LQ96CN4 794 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 RMDN1Q96DB5 314 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 CRELD1Q96HD1 420 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 SMG9Q9H0W8 520 aaKnown RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 ABCB6Q9NP58 842 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 VTI1BQ9UEU0 232 aa6.46□□□□□ -1.38
PABPC1-223ENST00000523636 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 YBX2Q9Y2T7 364 aaKnown RBP6.46□□□□□ -1.38
PABPC1-223ENST00000523636 PRR23AA6NEV1 266 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 PROB1E7EW31 1015 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 PPFIA4O75335 1185 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 WDHD1O75717 1129 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-223ENST00000523636 RGS9O75916 674 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-223ENST00000523636 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-223ENST00000523636 ITPKAP23677 461 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 INSM1Q01101 510 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms