RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 GDF6Q6KF10 455 aaPredicted RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 CWC27Q6UX04 472 aaKnown RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 ENAHQ8N8S7 591 aaPredicted RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 TBC1D5Q92609 795 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 KAT2BQ92831 832 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 EMID1Q96A84 441 aaPredicted RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 KATNAL1Q9BW62 490 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 CERS4Q9HA82 394 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 COL20A1Q9P218 1284 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 GBF1Q92538 1859 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 B4E1Z4 1266 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 RFXAPO00287 272 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 TLL1O43897 1013 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 EIF3JO75822 258 aaKnown RBP17.36■□□□□ 0.37
PRKDC-204ENST00000521331 BMP1P13497 986 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 IMMTQ16891 758 aaKnown RBP17.36■□□□□ 0.37
PRKDC-204ENST00000521331 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 CTAGE1Q96RT6 745 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 KRT23Q9C075 422 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 CNNM2Q9H8M5 875 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 DDX41Q9UJV9 622 aaKnown RBP17.36■□□□□ 0.37
PRKDC-204ENST00000521331 COG5Q9UP83 839 aa17.36■□□□□ 0.37
PRKDC-204ENST00000521331 EPOPA6NHQ4 379 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
PRKDC-204ENST00000521331 TFF2Q03403 129 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 LAMC2Q13753 1193 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 CNKSR3Q6P9H4 555 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 PPTC7Q8NI37 304 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 UBAC1Q9BSL1 405 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 JMJD4Q9H9V9 463 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 GTF2IRD1Q9UHL9 959 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
PRKDC-204ENST00000521331 CFBP00751 764 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 CXCL10P02778 98 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 NR3C2P08235 984 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 PSEN2P49810 448 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 WDR5P61964 334 aaKnown RBP17.34■□□□□ 0.37
PRKDC-204ENST00000521331 DHX38Q92620 1227 aaKnown RBP17.34■□□□□ 0.37
PRKDC-204ENST00000521331 AMNQ9BXJ7 453 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
PRKDC-204ENST00000521331 MAP3K20Q9NYL2 800 aaKnown RBP17.34■□□□□ 0.37
PRKDC-204ENST00000521331 PRRC2BQ5JSZ5 2229 aaKnown RBP17.33■□□□□ 0.37
PRKDC-204ENST00000521331 TANC1Q9C0D5 1861 aa17.33■□□□□ 0.37
PRKDC-204ENST00000521331 EFCAB14O75071 495 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 ARHGEF15O94989 841 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 F2P00734 622 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 CKBP12277 381 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 HSD17B4P51659 736 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 GHRHRQ02643 423 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 NUCB1Q02818 461 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 PTK7Q13308 1070 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 MFSD10Q14728 455 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 GPNMBQ14956 572 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
PRKDC-204ENST00000521331 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 SAMD3Q8N6K7 520 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 ZBED2Q9BTP6 218 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 SCN5AQ14524 2016 aa17.33■□□□□ 0.36
PRKDC-204ENST00000521331 ABHD14A-ACY1A0A1B0GW23 586 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 HOXD8P13378 290 aaPredicted RBP17.32■□□□□ 0.36
PRKDC-204ENST00000521331 KCNQ1P51787 676 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 GRB10Q13322 594 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 KIAA0753Q2KHM9 967 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 DHX37Q8IY37 1157 aaKnown RBP17.32■□□□□ 0.36
PRKDC-204ENST00000521331 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 TRANK1O15050 2925 aa17.32■□□□□ 0.36
PRKDC-204ENST00000521331 XIRP2A4UGR9 3374 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 HAS3O00219 553 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 NBNO60934 754 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 ZNF286BP0CG31 522 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 TRAF1Q13077 416 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 KRT40Q6A162 431 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 HLA-CQ95604 372 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
PRKDC-204ENST00000521331 PDCD2LQ9BRP1 358 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 C1QTNF1Q9BXJ1 281 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
PRKDC-204ENST00000521331 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 OPLAHO14841 1288 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 ZBTB5O15062 677 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 PPFIA4O75335 1185 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 GJB5O95377 273 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 DEFB103AP81534 67 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 IKBKEQ14164 716 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 RAD9AQ99638 391 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms