RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 SGSM2O43147 1006 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 SLPIP03973 132 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 RANGAP1P46060 587 aaPredicted RBP5.84□□□□□ -1.47
HDAC2-208ENST00000520746 GNL2Q13823 731 aaKnown RBP5.84□□□□□ -1.47
HDAC2-208ENST00000520746 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 TTLL6Q8N841 843 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
HDAC2-208ENST00000520746 DPF3Q92784 378 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 RCC1LQ96I51 464 aaKnown RBP5.84□□□□□ -1.47
HDAC2-208ENST00000520746 PHAXQ9H814 394 aaKnown RBP5.84□□□□□ -1.47
HDAC2-208ENST00000520746 TSC22D4Q9Y3Q8 395 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 SLC12A7Q9Y666 1083 aa5.84□□□□□ -1.47
HDAC2-208ENST00000520746 OVOL3O00110 214 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 DDX3XO00571 662 aaKnown RBP eCLIP5.83□□□□□ -1.48
HDAC2-208ENST00000520746 B4GALT3O60512 393 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 HMGA2P52926 109 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 ZC3H6P61129 1189 aaKnown RBP5.83□□□□□ -1.48
HDAC2-208ENST00000520746 SLC7A5Q01650 507 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 CRIP3Q6Q6R5 217 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 KLHL6Q8WZ60 621 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 AP5M1Q9H0R1 490 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 CLEC1BQ9P126 229 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 PPP4R1LQ9P1A2 415 aa5.83□□□□□ -1.48
HDAC2-208ENST00000520746 LAMTOR5O43504 91 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 GDF5P43026 501 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 GJA8P48165 433 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 ICAM4Q14773 271 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 NAALADL2Q58DX5 795 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 ZC3H18Q86VM9 953 aaKnown RBP5.82□□□□□ -1.48
HDAC2-208ENST00000520746 VPS37DQ86XT2 251 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 ZNF513Q8N8E2 541 aaPredicted RBP5.82□□□□□ -1.48
HDAC2-208ENST00000520746 KISS1RQ969F8 398 aaPredicted RBP5.82□□□□□ -1.48
HDAC2-208ENST00000520746 LCORQ96JN0 433 aaPredicted RBP5.82□□□□□ -1.48
HDAC2-208ENST00000520746 MMP19Q99542 508 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
HDAC2-208ENST00000520746 A0A1W2PQH9 124 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 PLS3P13797 630 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 ACVRL1P37023 503 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 RBM10P98175 930 aaKnown RBP5.81□□□□□ -1.48
HDAC2-208ENST00000520746 ADAM9Q13443 819 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 FAM126BQ8IXS8 530 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 C19orf47Q8N9M1 422 aaKnown RBP5.81□□□□□ -1.48
HDAC2-208ENST00000520746 RASGRP4Q8TDF6 673 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 SEC14L1Q92503 715 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 COPS5Q92905 334 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 SPATA32Q96LK8 384 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 CRBNQ96SW2 442 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 TINF2Q9BSI4 451 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 MRIQ9BWK5 157 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 SUGT1Q9Y2Z0 365 aa5.81□□□□□ -1.48
HDAC2-208ENST00000520746 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 THBDP07204 575 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 ZNF28P17035 718 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 STAT5AP42229 794 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 NASPP49321 788 aaPredicted RBP5.8□□□□□ -1.48
HDAC2-208ENST00000520746 SCRN1Q12765 414 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 COL9A2Q14055 689 aaPredicted RBP5.8□□□□□ -1.48
HDAC2-208ENST00000520746 ZFPM1Q8IX07 1006 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 KLC2Q9H0B6 622 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 CD248Q9HCU0 757 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 GPRC5CQ9NQ84 441 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 BTG4Q9NY30 223 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 APEX2Q9UBZ4 518 aa5.8□□□□□ -1.48
HDAC2-208ENST00000520746 C22orf46C9J442 243 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 CYR61O00622 381 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 KCNH1O95259 989 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 DNAJA1P31689 397 aaKnown RBP5.79□□□□□ -1.48
HDAC2-208ENST00000520746 SLC6A11P48066 632 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 GIPRP48546 466 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 EIF6P56537 245 aaKnown RBP5.79□□□□□ -1.48
HDAC2-208ENST00000520746 ARID5AQ03989 594 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 SURF1Q15526 300 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 INF2Q27J81 1249 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 SLC43A3Q8NBI5 491 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 MBD6Q96DN6 1003 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 SEC16BQ96JE7 1060 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 C8orf37Q96NL8 207 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 MENTQ9BUN1 341 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 AKT3Q9Y243 479 aa5.79□□□□□ -1.48
HDAC2-208ENST00000520746 GPR42O15529 346 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 ATF4P18848 351 aaPredicted RBP5.78□□□□□ -1.48
HDAC2-208ENST00000520746 FPR2P25090 351 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 SOX9P48436 509 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 PRAMEF18Q5VWM3 479 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 MILR1Q7Z6M3 343 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 PLEKHH3Q7Z736 793 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 DNERQ8NFT8 737 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 CPLX3Q8WVH0 158 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 ZNF747Q9BV97 191 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 EMC9Q9Y3B6 208 aa5.78□□□□□ -1.48
HDAC2-208ENST00000520746 YTHDC1Q96MU7 727 aaKnown RBP5.77□□□□□ -1.49
HDAC2-208ENST00000520746 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
HDAC2-208ENST00000520746 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.77□□□□□ -1.492e-6■■□□□ 13.2
HDAC2-208ENST00000520746 VPS11Q9H270 941 aa5.77□□□□□ -1.49
HDAC2-208ENST00000520746 CCDC180Q9P1Z9 1646 aa5.77□□□□□ -1.49
HDAC2-208ENST00000520746 ANKRD34BA5PLL1 514 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms