RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 DDX41Q9UJV9 622 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-203ENST00000517534 MTCH2Q9Y6C9 303 aa9.77□□□□□ -0.85
CTNNA1-203ENST00000517534 SCN10AQ9Y5Y9 1956 aa9.77□□□□□ -0.85
CTNNA1-203ENST00000517534 ABCB11O95342 1321 aa9.77□□□□□ -0.85
CTNNA1-203ENST00000517534 RAD50Q92878 1312 aa9.77□□□□□ -0.85
CTNNA1-203ENST00000517534 PRRC2BQ5JSZ5 2229 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 B4E1Z4 1266 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 OPLAHO14841 1288 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 GH1P01241 217 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 ACTN1P12814 892 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 GHRHRQ02643 423 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 NUCB1Q02818 461 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 TAP1Q03518 808 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 RBL2Q08999 1139 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 AAMPQ13685 434 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 PTGISQ16647 500 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 ASPRV1Q53RT3 343 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 CCDC178Q5BJE1 867 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 GDF6Q6KF10 455 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 CWC27Q6UX04 472 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 SEPT14Q6ZU15 432 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 SPRED2Q7Z698 418 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 IQCA1Q86XH1 822 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 HERC6Q8IVU3 1022 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 NSUN6Q8TEA1 469 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 UHRF1Q96T88 793 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 RMDN3Q96TC7 470 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 KAT14Q9H8E8 782 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 CERS4Q9HA82 394 aa9.76□□□□□ -0.85
CTNNA1-203ENST00000517534 HAS3O00219 553 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 EIF3JO75822 258 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 RGS20O76081 388 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 CXCL10P02778 98 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 CASTP20810 708 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 TFF2Q03403 129 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 BFSP2Q13515 415 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 STXBP2Q15833 593 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 SLC35G1Q2M3R5 365 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 TCTN1Q2MV58 587 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 KRT40Q6A162 431 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 FBXO11Q86XK2 927 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 MCF2L2Q86YR7 1114 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 CAGE1Q8TC20 777 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 AFAP1L1Q8TED9 768 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 MTMR8Q96EF0 704 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 DSCC1Q9BVC3 393 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 IL25Q9H293 177 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 VAT1LQ9HCJ6 419 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 PXMP2Q9NR77 195 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 HDAC6Q9UBN7 1215 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 GTF2IRD1Q9UHL9 959 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 MRPL11Q9Y3B7 192 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-203ENST00000517534 LCHNA4D1U4 455 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 LPXNO60711 386 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 NBNO60934 754 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 BAIAP3O94812 1187 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 NR3C2P08235 984 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 PARP1P09874 1014 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 SELPP16109 830 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 EIF2AK2P19525 551 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 PSEN2P49810 448 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 HSD17B4P51659 736 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 CHMP4BP1P59074 171 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 WDR5P61964 334 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 HIC1Q14526 733 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 SEC23AQ15436 765 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 TRIM71Q2Q1W2 868 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 ARHGEF16Q5VV41 709 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 ARNTL2Q8WYA1 636 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 WNT8BQ93098 351 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 DIAPH3Q9NSV4 1193 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
CTNNA1-203ENST00000517534 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 KIF28PB7ZC32 967 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 KLRF2D3W0D1 207 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 HIP1O00291 1037 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 F2P00734 622 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 CFBP00751 764 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 CKBP12277 381 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 COL9A1P20849 921 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 ZNF200P98182 395 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 SP2Q02086 613 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 GRB10Q13322 594 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 LAMC2Q13753 1193 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 DGKDQ16760 1214 aa9.73□□□□□ -0.85
CTNNA1-203ENST00000517534 IMMTQ16891 758 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms