RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TRIM55Q9BYV6 548 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 GPRC5CQ9NQ84 441 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 TIMM13Q9Y5L4 95 aaPredicted RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 U2SURPO15042 1029 aaKnown RBP5.27□□□□□ -1.57
CAST-242ENST00000515063 FUCA1P04066 466 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 CAP1Q01518 475 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 SLC10A6Q3KNW5 377 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 MRM1Q6IN84 353 aaKnown RBP5.27□□□□□ -1.57
CAST-242ENST00000515063 SP8Q8IXZ3 490 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 CKAP2LQ8IYA6 745 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 NPLOC4Q8TAT6 608 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 HNRNPLLQ8WVV9 542 aaKnown RBP5.27□□□□□ -1.57
CAST-242ENST00000515063 SGSM3Q96HU1 749 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 PWWP2AQ96N64 755 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 SETD5Q9C0A6 1442 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 PCDH18Q9HCL0 1135 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 MARCH2Q9P0N8 246 aa5.27□□□□□ -1.57
CAST-242ENST00000515063 SNAPC4Q5SXM2 1469 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 SASH1O94885 1247 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 IGFBP6P24592 240 aaPredicted RBP5.26□□□□□ -1.57
CAST-242ENST00000515063 NCKAP1LP55160 1127 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 GFRA1P56159 465 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 TESK1Q15569 626 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 MROH9Q5TGP6 573 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 RIOX2Q8IUF8 465 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 PPIL6Q8IXY8 311 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 ST13P5Q8NFI4 369 aaPredicted RBP5.26□□□□□ -1.57
CAST-242ENST00000515063 MICAL1Q8TDZ2 1067 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 CPA5Q8WXQ8 436 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 KCTD13Q8WZ19 329 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 ZCCHC4Q9H5U6 513 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 COA3Q9Y2R0 106 aaPredicted RBP5.26□□□□□ -1.57
CAST-242ENST00000515063 PBRM1Q86U86 1689 aa5.26□□□□□ -1.57
CAST-242ENST00000515063 C22orf46C9J442 243 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 KLF4O43474 513 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 NTRK1P04629 796 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 ASGR2P07307 311 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 BMP7P18075 431 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 FBLN1P23142 703 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 LTBRP36941 435 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 SLC6A11P48066 632 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 MAP4K2Q12851 820 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 RAB33AQ14088 237 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 HSP90AA2PQ14568 343 aaPredicted RBP5.25□□□□□ -1.57
CAST-242ENST00000515063 CHRNA2Q15822 529 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 NBPF6Q5VWK0 638 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 B3GNT8Q7Z7M8 397 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 TMEFF1Q8IYR6 380 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 SEC14L1Q92503 715 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 TRMT2BQ96GJ1 504 aaKnown RBP5.25□□□□□ -1.57
CAST-242ENST00000515063 TMEM169Q96HH4 297 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 NBPF4Q96M43 638 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 BTG4Q9NY30 223 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 PPP1R1BQ9UD71 204 aaPredicted RBP5.25□□□□□ -1.57
CAST-242ENST00000515063 RAB3GAP2Q9H2M9 1393 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 SUPT6HQ7KZ85 1726 aaKnown RBP5.25□□□□□ -1.57
CAST-242ENST00000515063 GRIN2BQ13224 1484 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 CCDC18Q5T9S5 1454 aa5.25□□□□□ -1.57
CAST-242ENST00000515063 FHOD3Q2V2M9 1422 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 EHBP1L1Q8N3D4 1523 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 TBX1O43435 398 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 INHBBP09529 407 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 ATP2B1P20020 1258 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PMLP29590 882 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 LIMS1P48059 325 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PPP2R2AP63151 447 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 FOXO4P98177 505 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 MBLAC2Q68D91 279 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 TTLL10Q6ZVT0 673 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 ZC3H18Q86VM9 953 aaKnown RBP5.24□□□□□ -1.57
CAST-242ENST00000515063 TEX2Q8IWB9 1127 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 LRRC47Q8N1G4 583 aaKnown RBP5.24□□□□□ -1.57
CAST-242ENST00000515063 CELF2-AS1Q8N7Q2 184 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 LINC01356Q8N9X3 169 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PLEKHO2Q8TD55 490 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PANK1Q8TE04 598 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 ZNF669Q96BR6 464 aaPredicted RBP5.24□□□□□ -1.57
CAST-242ENST00000515063 C8orf37Q96NL8 207 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 LGR4Q9BXB1 951 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 TANGO6Q9C0B7 1094 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 NGRNQ9NPE2 291 aaKnown RBP5.24□□□□□ -1.57
CAST-242ENST00000515063 HCFC2Q9Y5Z7 792 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PMF1-BGLAPU3KQ54 211 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 PHLDB1Q86UU1 1377 aa5.24□□□□□ -1.57
CAST-242ENST00000515063 ARHGEF11O15085 1522 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 MAPKBP1O60336 1514 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 H7BY64 318 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 PPP1R11O60927 126 aaPredicted RBP5.23□□□□□ -1.57
CAST-242ENST00000515063 CACNB2Q08289 660 aaPredicted RBP5.23□□□□□ -1.57
CAST-242ENST00000515063 LSAMPQ13449 338 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 INF2Q27J81 1249 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 CEP68Q76N32 757 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 Q8N1Y9 231 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms