RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SAGE1Q9NXZ1 904 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
PFDN1-204ENST00000512707 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 TNRC18O15417 2968 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-204ENST00000512707 ELP1O95163 1332 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
PFDN1-204ENST00000512707 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
PFDN1-204ENST00000512707 TRPA1O75762 1119 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 MYCLP12524 364 aaPredicted RBP12.31□□□□□ -0.44
PFDN1-204ENST00000512707 PTPREP23469 700 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 ADORA2AP29274 412 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 PDE4DQ08499 809 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 NBR1Q14596 966 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 ARHGEF6Q15052 776 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 PGM5Q15124 567 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 CALCRLQ16602 461 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 PDCD2LQ9BRP1 358 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 COL20A1Q9P218 1284 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 RCOR1Q9UKL0 485 aa12.31□□□□□ -0.44
PFDN1-204ENST00000512707 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 ASB14A6NK59 587 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 PPP6R2O75170 966 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 NR3C2P08235 984 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 OR52Z1P0C646 297 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CYP3A7P24462 503 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CIITAP33076 1130 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 MCM4P33991 863 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 PRPHP41219 470 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 ALDH5A1P51649 535 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 UBXN2AP68543 259 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CNTN2Q02246 1040 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 SP3Q02447 781 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 PTGDRQ13258 359 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 GRB14Q14449 540 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 STXBP2Q15833 593 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CEP55Q53EZ4 464 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 PRR16Q569H4 304 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 NIPA1Q7RTP0 329 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 NLRX1Q86UT6 975 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 SLFN12Q8IYM2 578 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 KRI1Q8N9T8 703 aaKnown RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CRYGNQ8WXF5 182 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 TCEAL9Q9UHQ7 104 aa12.3□□□□□ -0.44
PFDN1-204ENST00000512707 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-204ENST00000512707 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 TBX3O15119 743 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 PRPF40AO75400 957 aaKnown RBP12.29□□□□□ -0.44
PFDN1-204ENST00000512707 TDP2O95551 362 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 TBC1D8O95759 1140 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 PGK2P07205 417 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 RGS2P41220 211 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-204ENST00000512707 Q4G0T1 1027 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 DTHD1Q6ZMT9 781 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-204ENST00000512707 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 GDPD2Q9HCC8 539 aa12.29□□□□□ -0.44
PFDN1-204ENST00000512707 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
PFDN1-204ENST00000512707 MAFGO15525 162 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 CUTAO60888 179 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 EIF3JO75822 258 aaKnown RBP12.28□□□□□ -0.44
PFDN1-204ENST00000512707 HOXD10P28358 340 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MARCKSP29966 332 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-204ENST00000512707 TXLNAP40222 546 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 UBE2HP62256 183 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MAP2K5Q13163 448 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MTMR1Q13613 665 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 PTPAQ15257 358 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
PFDN1-204ENST00000512707 GPRASP2Q96D09 838 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 CHAMP1Q96JM3 812 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MBOAT7Q96N66 472 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 MXRA8Q9BRK3 442 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
PFDN1-204ENST00000512707 PLXNB2O15031 1838 aa12.27□□□□□ -0.44
PFDN1-204ENST00000512707 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.44
PFDN1-204ENST00000512707 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
PFDN1-204ENST00000512707 FAM86B1E9PN63 330 aa12.27□□□□□ -0.45
PFDN1-204ENST00000512707 MEIS1O00470 390 aa12.27□□□□□ -0.45
PFDN1-204ENST00000512707 SLC37A4O43826 429 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms