RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 REV1Q9UBZ9 1251 aa6.89□□□□□ -1.31
AC012055.1-201ENST00000511346 USP25Q9UHP3 1055 aa6.89□□□□□ -1.31
AC012055.1-201ENST00000511346 HDAC9Q9UKV0 1011 aa6.89□□□□□ -1.31
AC012055.1-201ENST00000511346 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
AC012055.1-201ENST00000511346 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 HTR3BO95264 441 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 TRIM27P14373 513 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 CPEP16870 476 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 CRKP46108 304 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 MPP2Q14168 576 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 PUM3Q15397 648 aaKnown RBP6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 ALDH1L2Q3SY69 923 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 SEZ6Q53EL9 994 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 CCDC92Q53HC0 331 aaPredicted RBP6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 FAM133BQ5BKY9 247 aaKnown RBP6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 ZNF354CQ86Y25 554 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 IRF2BP1Q8IU81 584 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 NIM1KQ8IY84 436 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 JMYQ8N9B5 988 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 SKA1Q96BD8 255 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 ASPSCR1Q9BZE9 553 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 CSRNP2Q9H175 543 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 RETREG1Q9H6L5 497 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 PUF60Q9UHX1 559 aaKnown RBP6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 PTCH2Q9Y6C5 1203 aa6.88□□□□□ -1.31
AC012055.1-201ENST00000511346 CHURC1-FNTBB4DL54 471 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 DNAJA2O60884 412 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 RPN1P04843 607 aaKnown RBP6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 ZGLP1P0C6A0 271 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 SRGNP10124 158 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 EGR3Q06889 387 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 TSPYL5Q86VY4 417 aaPredicted RBP6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 OXR1Q8N573 874 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 MAGEB6Q8N7X4 407 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 NINJ1Q92982 152 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 SLC6A17Q9H1V8 727 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 C19orf44Q9H6X5 657 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 KCNH3Q9ULD8 1083 aa6.87□□□□□ -1.31
AC012055.1-201ENST00000511346 A0A1W2PRQ8 180 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 GRIN3BO60391 1043 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 FAM200BP0CF97 657 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 RBP3P10745 1247 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 HOXA5P20719 270 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 ZNF165P49910 485 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 PDE1CQ14123 709 aaPredicted RBP6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 NR0B2Q15466 257 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 LONRF1Q17RB8 773 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 MMS22LQ6ZRQ5 1243 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 NECAB2Q7Z6G3 386 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 MORC1Q86VD1 984 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 PASD1Q8IV76 773 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 CELF2-AS1Q8N7Q2 184 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 FBXO27Q8NI29 283 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 SHDQ96IW2 340 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 MPP4Q96JB8 637 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 CCDC74BQ96LY2 380 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 MCOLN1Q9GZU1 580 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 AASDHPPTQ9NRN7 309 aa6.86□□□□□ -1.31
AC012055.1-201ENST00000511346 FITM1A5D6W6 292 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 FIBPO43427 364 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 PDE8AO60658 829 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 PEX10O60683 326 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 LRRN2O75325 713 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 KATNA1O75449 491 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 U2AF1L5P0DN76 240 aaPredicted RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 RRM1P23921 792 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 MCM4P33991 863 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 EIF6P56537 245 aaKnown RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 U2AF1Q01081 240 aaKnown RBP eCLIP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 ANKRD23Q86SG2 305 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 CHMP4CQ96CF2 233 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 C20orf173Q96LM9 149 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 CRBNQ96SW2 442 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 ALDH8A1Q9H2A2 487 aaPredicted RBP6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 PRDM11Q9NQV5 511 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 KLHL3Q9UH77 587 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 PPT2Q9UMR5 302 aa6.85□□□□□ -1.31
AC012055.1-201ENST00000511346 KDM2BQ8NHM5 1336 aa6.84□□□□□ -1.31
AC012055.1-201ENST00000511346 MYOCOSA0A1B0GUC4 107 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms