RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 MAF1Q9H063 256 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 LAMA4Q16363 1823 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 PRRC2BQ5JSZ5 2229 aaKnown RBP16.21■□□□□ 0.18
TSPAN17-206ENST00000507471 ABCB11O95342 1321 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 TRANK1O15050 2925 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 NBNO60934 754 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 CXCL10P02778 98 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 CKBP12277 381 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 STXBP2Q15833 593 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 TCTN1Q2MV58 587 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 CNKSR3Q6P9H4 555 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 NSUN6Q8TEA1 469 aaKnown RBP16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 GDPD5Q8WTR4 605 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 ZBED2Q9BTP6 218 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 EPHX3Q9H6B9 360 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 GTF2IRD1Q9UHL9 959 aa16.2■□□□□ 0.18
TSPAN17-206ENST00000507471 PARNO95453 639 aaKnown RBP16.19■□□□□ 0.18
TSPAN17-206ENST00000507471 DGKDQ16760 1214 aa16.19■□□□□ 0.18
TSPAN17-206ENST00000507471 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
TSPAN17-206ENST00000507471 RMDN3Q96TC7 470 aa16.19■□□□□ 0.18
TSPAN17-206ENST00000507471 HDAC6Q9UBN7 1215 aa16.19■□□□□ 0.18
TSPAN17-206ENST00000507471 TRIM6-TRIM34B2RNG4 842 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 ZNF213O14771 459 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 EIF2AK2P19525 551 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 QRICH1Q2TAL8 776 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 MCF2L2Q86YR7 1114 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 C7orf31Q8N865 590 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 RILPL2Q969X0 211 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 ALG1Q9BT22 464 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 LRFN3Q9BTN0 628 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 KAT14Q9H8E8 782 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-206ENST00000507471 SIP14410 1827 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 KDM4AO75164 1064 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 GJB5O95377 273 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 F2P00734 622 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 ZNF286BP0CG31 522 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 PSEN2P49810 448 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 PTK7Q13308 1070 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 HDAC1Q13547 482 aaPredicted RBP16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 MFSD10Q14728 455 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 TRIM71Q2Q1W2 868 aaKnown RBP16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 ARHGEF16Q5VV41 709 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 IQCA1Q86XH1 822 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 PPTC7Q8NI37 304 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 WNT8BQ93098 351 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 SUGCTQ9HAC7 445 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 MTUS1Q9ULD2 1270 aa16.17■□□□□ 0.18
TSPAN17-206ENST00000507471 MYH6P13533 1939 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 LINC01553A4QN01 128 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 HAS3O00219 553 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 NR3C2P08235 984 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 SDSP20132 328 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 ZNF618Q5T7W0 954 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 FBXO11Q86XK2 927 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 TGS1Q96RS0 853 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 RAD9AQ99638 391 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 JMJD4Q9H9V9 463 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 PXMP2Q9NR77 195 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
TSPAN17-206ENST00000507471 B4E1Z4 1266 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 OPLAHO14841 1288 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 EFCAB14O75071 495 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 CFBP00751 764 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 NT5C2P49902 561 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 ERVK-21P61565 698 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 ZNF200P98182 395 aaPredicted RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 IKBKEQ14164 716 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 HIC1Q14526 733 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 ANKS1AQ92625 1134 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
TSPAN17-206ENST00000507471 RGS20O76081 388 aa16.14■□□□□ 0.17
TSPAN17-206ENST00000507471 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
TSPAN17-206ENST00000507471 HSD17B4P51659 736 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms