RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 FUT2Q10981 343 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 GKAP1Q5VSY0 366 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 TTLL7Q6ZT98 887 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 P2RX5Q93086 422 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 NOC4LQ9BVI4 516 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 TLR10Q9BXR5 811 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 TPX2Q9ULW0 747 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 BCORQ6W2J9 1755 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 RBAK-RBAKDNI3L0D1 243 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 FGFR1OPO95684 399 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 GLI1P08151 1106 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 SEC24CP53992 1094 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 SEC23AQ15436 765 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 C11orf91Q3C1V1 193 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 EARS2Q5JPH6 523 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 CNOT6LQ96LI5 555 aaKnown RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 ISCUQ9H1K1 167 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-208ENST00000506368 FAM205CA6NFA0 338 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 GSG1L2A8MUP6 293 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 DDAH1O94760 285 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 MTIF2P46199 727 aaKnown RBP17.53■□□□□ 0.4
SCLT1-208ENST00000506368 SCTRP47872 440 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 GUCY2DQ02846 1103 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 TCIRG1Q13488 830 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 SPDYCQ5MJ68 293 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 KLHDC7AQ5VTJ3 777 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 MAATS1Q7Z4T9 603 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 CATIPQ7Z7H3 387 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 OSBPL7Q9BZF2 842 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 CCSER1Q9C0I3 900 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 KBTBD4Q9NVX7 518 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 ARHGAP20Q9P2F6 1191 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 PLAAQ9Y263 795 aa17.53■□□□□ 0.4
SCLT1-208ENST00000506368 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
SCLT1-208ENST00000506368 LAD1O00515 517 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 COBLO75128 1261 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 MBD4O95243 580 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 MYBP10242 640 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 CALML3P27482 149 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 ICA1Q05084 483 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 CENPTQ96BT3 561 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 SEC16BQ96JE7 1060 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 MLXIPQ9HAP2 919 aa17.52■□□□□ 0.4
SCLT1-208ENST00000506368 KLRC4O43908 158 aa17.52■□□□□ 0.39
SCLT1-208ENST00000506368 GBP2P32456 591 aaPredicted RBP17.52■□□□□ 0.39
SCLT1-208ENST00000506368 PMS1P54277 932 aaKnown RBP17.52■□□□□ 0.39
SCLT1-208ENST00000506368 PPP2R2AP63151 447 aa17.52■□□□□ 0.39
SCLT1-208ENST00000506368 DUSP9Q99956 384 aaKnown RBP17.52■□□□□ 0.39
SCLT1-208ENST00000506368 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.39
SCLT1-208ENST00000506368 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.39
SCLT1-208ENST00000506368 DLEC1Q9Y238 1755 aa17.52■□□□□ 0.39
SCLT1-208ENST00000506368 COL5A3P25940 1745 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 CFAP73A6NFT4 308 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 PPP2R5AQ15172 486 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 MIIPQ5JXC2 388 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 TYW1BQ6NUM6 668 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 FOXR2Q6PJQ5 311 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 SYN2Q92777 582 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 TATDN2Q93075 761 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 PPANQ9NQ55 473 aaKnown RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 MAPK8IP1Q9UQF2 711 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 TNKSO95271 1327 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 NEBLO76041 1014 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 EIF4A3P38919 411 aaKnown RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 NPY5RQ15761 445 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 MSL1Q68DK7 614 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 VGLL2Q8N8G2 317 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-208ENST00000506368 CASKIN2Q8WXE0 1202 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 EBF2Q9HAK2 575 aa17.51■□□□□ 0.39
SCLT1-208ENST00000506368 PDE8BO95263 885 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 FAM153BP0C7A2 387 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 FAM153CQ494X1 144 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 ANKS4BQ8N8V4 417 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 CCT6BQ92526 530 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 CALR3Q96L12 384 aaKnown RBP17.5■□□□□ 0.39
SCLT1-208ENST00000506368 SCLT1Q96NL6 688 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 FAM153AQ9UHL3 310 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 LEMD3Q9Y2U8 911 aa17.5■□□□□ 0.39
SCLT1-208ENST00000506368 DNM1LO00429 736 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 ASTE1Q2TB18 679 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms