RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TMEFF2Q9UIK5 374 aaPredicted RBP5.71□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TBX22Q9Y458 520 aa5.71□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
PDLIM1P4-201ENST00000504327 WRNQ14191 1432 aaPredicted RBP eCLIP5.71□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TOP2BQ02880 1626 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BIVM-ERCC5R4GMW8 1640 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 F8W031 263 aaPredicted RBP5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NPHS1O60500 1241 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CABP7Q86V35 215 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CCDC103Q8IW40 242 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TMEFF1Q8IYR6 380 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 DPF3Q92784 378 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 GPATCH3Q96I76 525 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MMP19Q99542 508 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BRINP2Q9C0B6 783 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BCAS3Q9H6U6 928 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 EPB41L4AQ9HCS5 686 aaPredicted RBP5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BTG4Q9NY30 223 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MARCH2Q9P0N8 246 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 DBR1Q9UK59 544 aaKnown RBP5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SOGA1O94964 1423 aa5.7□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RFXAPO00287 272 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 STK10O94804 968 aaKnown RBP5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FUCA1P04066 466 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FBLN1P23142 703 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 GRIA2P42262 883 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 KCNJ6P48051 423 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 GFRA1P56159 465 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PPP2R2AP63151 447 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PRR5P85299 388 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RAB33AQ14088 237 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RNF187Q5TA31 235 aaPredicted RBP5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TEX2Q8IWB9 1127 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TMEM145Q8NBT3 493 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 EPN3Q9H201 632 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 KLHL42Q9P2K6 505 aa5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NOP58Q9Y2X3 529 aaKnown RBP5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 AQRO60306 1485 aaKnown RBP eCLIP5.69□□□□□ -1.5
PDLIM1P4-201ENST00000504327 EIF4G3O43432 1585 aaKnown RBP5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 WDR97A6NE52 1622 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 A0A1W2PQU0 124 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 AGRPO00253 132 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ARNTLO00327 626 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MEFVO15553 781 aaPredicted RBP5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BUB1BO60566 1050 aaPredicted RBP5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SCG5P05408 212 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FPR2P25090 351 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 HOXC12P31275 282 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 LIMS1P48059 325 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ZNF385BQ569K4 471 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 DENND5AQ6IQ26 1287 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PPIL6Q8IXY8 311 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 KREMEN2Q8NCW0 462 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PMFBP1Q8TBY8 1022 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MORC4Q8TE76 937 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 C1orf159Q96HA4 380 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TRIM55Q9BYV6 548 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FBXL7Q9UJT9 491 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SIT1Q9Y3P8 196 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ABCA10Q8WWZ4 1543 aa5.68□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TDRD9Q8NDG6 1382 aaKnown RBP5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NTRK1P04629 796 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 MC3RP41968 323 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RBL2Q08999 1139 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 KCNAB2Q13303 367 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 E4F1Q66K89 784 aaPredicted RBP5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NLRP10Q86W26 655 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CKAP2LQ8IYA6 745 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NETO2Q8NC67 525 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PLEKHO2Q8TD55 490 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ALG3Q92685 438 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 DIO2Q92813 273 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SLC52A1Q9NWF4 448 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 IRS2Q9Y4H2 1338 aa5.67□□□□□ -1.5
PDLIM1P4-201ENST00000504327 HMGB1P1B2RPK0 211 aaPredicted RBP5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CPP00450 1065 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CAPNS1P04632 268 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 LCP1P13796 627 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PFKLP17858 780 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 IGFBP6P24592 240 aaPredicted RBP5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PMLP29590 882 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RPL11P62913 178 aaKnown RBP5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FBLN7Q53RD9 439 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ACBD5Q5T8D3 534 aaPredicted RBP5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CNKSR3Q6P9H4 555 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 AMIGO3Q86WK7 504 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 FAM129CQ86XR2 697 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SIAH1Q8IUQ4 282 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TSPAN17Q96FV3 270 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PEX11GQ96HA9 241 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 PIF1Q9H611 641 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms