RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GJC2Q5T442 439 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-208ENST00000494334 CCDC148Q8NFR7 591 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 PAWRQ96IZ0 340 aaKnown RBP15.53■□□□□ 0.08
COL1A1-208ENST00000494334 PGBD1Q96JS3 809 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-208ENST00000494334 TMEM260Q9NX78 707 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 ORC3Q9UBD5 711 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-208ENST00000494334 SYNRGQ9UMZ2 1314 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 DNM1LO00429 736 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 JAK2O60674 1132 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 ARIH2O95376 493 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 FOSP01100 380 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-208ENST00000494334 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-208ENST00000494334 GJA9P57773 515 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 NLRP5P59047 1200 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-208ENST00000494334 TTLL4Q14679 1199 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 PCNX4Q63HM2 1172 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 KLHDC9Q8NEP7 349 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 UPF3AQ9H1J1 476 aaKnown RBP15.52■□□□□ 0.08
COL1A1-208ENST00000494334 RTEL1Q9NZ71 1219 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 Q9Y3F1 56 aa15.52■□□□□ 0.08
COL1A1-208ENST00000494334 MYADML2A6NDP7 307 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 CTAGE5O15320 804 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 DYNC1LI2O43237 492 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-208ENST00000494334 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
COL1A1-208ENST00000494334 AP3B2Q13367 1082 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 XRRA1Q6P2D8 792 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 CCDC62Q6P9F0 684 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 NECAB2Q7Z6G3 386 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 RNF180Q86T96 592 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 TLK2Q86UE8 772 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 COPS5Q92905 334 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 ANO3Q9BYT9 981 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 C11orf49Q9H6J7 331 aa15.51■□□□□ 0.07
COL1A1-208ENST00000494334 DDX41Q9UJV9 622 aaKnown RBP15.51■□□□□ 0.07
COL1A1-208ENST00000494334 NKRFO15226 690 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 STAM2O75886 525 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 C6orf222P0C671 652 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 COL6A1P12109 1028 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 MCM2P49736 904 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 NKX3-2P78367 333 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 LY6KQ17RY6 165 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 CCSAPQ6IQ19 270 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 FAM177A1Q8N128 213 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 REXO1Q8N1G1 1221 aaKnown RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 BICD2Q8TD16 824 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 RASGRP4Q8TDF6 673 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 WASF1Q92558 559 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 INPP4AQ96PE3 977 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 LLPHQ9BRT6 129 aaKnown RBP15.5■□□□□ 0.07
COL1A1-208ENST00000494334 ALG1Q9BT22 464 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 EHMT1Q9H9B1 1298 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 SPC25Q9HBM1 224 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 GJB4Q9NTQ9 266 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 KCNJ14Q9UNX9 436 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 MRVI1Q9Y6F6 885 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 LRRC37A2A6NM11 1700 aa15.5■□□□□ 0.07
COL1A1-208ENST00000494334 KBTBD13C9JR72 458 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 XBP1P17861 261 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 CST5P28325 142 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-208ENST00000494334 MLLT1Q03111 559 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-208ENST00000494334 NPY5RQ15761 445 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 KCNA10Q16322 511 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 PHF20Q9BVI0 1012 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 AP5M1Q9H0R1 490 aa15.49■□□□□ 0.07
COL1A1-208ENST00000494334 M0R2N6 131 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 TGFB3P10600 412 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 ITGB5P18084 799 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 ICAM3P32942 547 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 SREBF1P36956 1147 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 BEX3Q00994 111 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 SP2Q02086 613 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 GNPTABQ3T906 1256 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 GNASQ5JWF2 1037 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 GALNT17Q6IS24 598 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 KCNV1Q6PIU1 500 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 BLIDQ8IZY5 108 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 DAGLBQ8NCG7 672 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 OR6J1Q8NGC5 347 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
COL1A1-208ENST00000494334 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-208ENST00000494334 PHF24Q9UPV7 400 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 UBIAD1Q9Y5Z9 338 aa15.48■□□□□ 0.07
COL1A1-208ENST00000494334 MKI67P46013 3256 aaKnown RBP15.47■□□□□ 0.07
COL1A1-208ENST00000494334 MOXD2PA6NHM9 499 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 SPATA31C2B4DYI2 1134 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 GH1P01241 217 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 ASGR1P07306 291 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 ARHGAP4P98171 946 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 FSCN1Q16658 493 aaKnown RBP15.47■□□□□ 0.07
COL1A1-208ENST00000494334 NLRX1Q86UT6 975 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 PCSK9Q8NBP7 692 aaKnown RBP15.47■□□□□ 0.07
COL1A1-208ENST00000494334 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms