RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SV2BQ7L1I2 683 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 SMYD4Q8IYR2 804 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 RAD54LQ92698 747 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 LENG9Q96B70 501 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 FAM20AQ96MK3 541 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 TRIM9Q9C026 710 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 XPO4Q9C0E2 1151 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 LRRC27Q9C0I9 530 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 NT5C3AQ9H0P0 336 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 BLOC1S4Q9NUP1 217 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 EXOC1Q9NV70 894 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 FANCLQ9NW38 375 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 TMOD4Q9NZQ9 345 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 FZD1Q9UP38 647 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 ZHX2Q9Y6X8 837 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 KIAA1217Q5T5P2 1943 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 FAM86B1E9PN63 330 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 RHOBTB3O94955 611 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 FAM86B2P0C5J1 330 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 ALAS1P13196 640 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 ZNF18P17022 549 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 PTGS1P23219 599 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 CLCN1P35523 988 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 PPP1R2P41236 205 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 HMGCS2P54868 508 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 UBASH3AP57075 661 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 SETQ01105 290 aaPredicted RBP10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 PAK1Q13153 545 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 MCM6Q14566 821 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 DPY19L2Q6NUT2 758 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 CCDC186Q7Z3E2 898 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 CPXCR1Q8N123 301 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 CLEC4DQ8WXI8 215 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 GJA10Q969M2 543 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 ATG4CQ96DT6 458 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 RWDD2AQ9UIY3 292 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 GDAQ9Y2T3 454 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 RPTORQ8N122 1335 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 LCTP09848 1927 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
SMARCC1-208ENST00000492896 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 NFIBO00712 420 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 MSH4O15457 936 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 USP2O75604 605 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 CDK11BP21127 795 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 STAT3P40763 770 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 OAZ1P54368 228 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 STX17P56962 302 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 GSDMDP57764 484 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 PDE4DQ08499 809 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 PRKG1Q13976 671 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 VGLL4Q14135 290 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 DHX8Q14562 1220 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 TPD52L1Q16890 204 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 CNNM4Q6P4Q7 775 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 USP50Q70EL3 339 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 UNC13DQ70J99 1090 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 TMC6Q7Z403 805 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 NELFBQ8WX92 580 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 ZNF830Q96NB3 372 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 UIMC1Q96RL1 719 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 KCNF1Q9H3M0 494 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 MAP3K20Q9NYL2 800 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 VAV3Q9UKW4 847 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 AFG3L2Q9Y4W6 797 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 CSADQ9Y600 493 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 SNCAIPQ9Y6H5 919 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 MYH11P35749 1972 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 MYPNQ86TC9 1320 aa10.24□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 MYMKA6NI61 221 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 POTECB2RU33 542 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 VWA5AO00534 786 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 PSMA7O14818 248 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 ZNF500O60304 480 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 DSG3P32926 999 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 EPHX2P34913 555 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 NF2P35240 595 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 PRCPP42785 496 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 IREB2P48200 963 aaKnown RBP10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 UBXN2AP68543 259 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms