RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SGSM2O43147 1006 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-206ENST00000484733 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
SCFD1-206ENST00000484733 DGKDQ16760 1214 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 SYMPKQ92797 1274 aaKnown RBP13.31□□□□□ -0.28
SCFD1-206ENST00000484733 SLC28A3Q9HAS3 691 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 PCDHA1Q9Y5I3 950 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 ERICH2A1L162 156 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
SCFD1-206ENST00000484733 SLC35G1Q2M3R5 365 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 VSIG10LQ86VR7 867 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
SCFD1-206ENST00000484733 E7EWF7 191 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 HAS3O00219 553 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 TROAPQ12815 778 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 WTAPQ15007 396 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 PTGISQ16647 500 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 USP38Q8NB14 1042 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 CTAGE1Q96RT6 745 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 SLC9A7Q96T83 725 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 MRVI1Q9Y6F6 885 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 RGS20O76081 388 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 GDF6Q6KF10 455 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 DEFB128Q7Z7B8 93 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
SCFD1-206ENST00000484733 GTF2IRD1Q9UHL9 959 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
SCFD1-206ENST00000484733 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-206ENST00000484733 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 TGFB3P10600 412 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 PSEN2P49810 448 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 ADGRE1Q14246 886 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 PGM5Q15124 567 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 IGDCC4Q8TDY8 1250 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 PIGSQ96S52 555 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 CYTH3O43739 400 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 F2P00734 622 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 CCND2P30279 289 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 RABGGTBP53611 331 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 CELF3Q5SZQ8 465 aaKnown RBP13.29□□□□□ -0.28
SCFD1-206ENST00000484733 MB21D2Q8IYB1 491 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-206ENST00000484733 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
SCFD1-206ENST00000484733 MYH7BA7E2Y1 1941 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 SELPP16109 830 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 ANTXR2P58335 489 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 PPP1R13LQ8WUF5 828 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
SCFD1-206ENST00000484733 TAF6LQ9Y6J9 622 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
SCFD1-206ENST00000484733 STAM2O75886 525 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 CXCL10P02778 98 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 MYCLP12524 364 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-206ENST00000484733 POU3F3P20264 500 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-206ENST00000484733 PTK7Q13308 1070 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 MFSD10Q14728 455 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 GPNMBQ14956 572 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 TMEM67Q5HYA8 995 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 TJAP1Q5JTD0 557 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCFD1-206ENST00000484733 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
SCFD1-206ENST00000484733 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.28
SCFD1-206ENST00000484733 HOMER1Q86YM7 354 aa13.27□□□□□ -0.28
SCFD1-206ENST00000484733 C7orf31Q8N865 590 aa13.27□□□□□ -0.28
SCFD1-206ENST00000484733 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.28
SCFD1-206ENST00000484733 DDAH1O94760 285 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 MYOGP15173 224 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 ICAM3P32942 547 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
SCFD1-206ENST00000484733 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 IL31RAQ8NI17 732 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 SPZ1Q9BXG8 430 aa13.27□□□□□ -0.29
SCFD1-206ENST00000484733 RBM8AQ9Y5S9 174 aaKnown RBP13.27□□□□□ -0.29
SCFD1-206ENST00000484733 TRIP12Q14669 1992 aaPredicted RBP13.26□□□□□ -0.29
SCFD1-206ENST00000484733 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
SCFD1-206ENST00000484733 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms