RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 DEXIO95424 95 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 CCND2P30279 289 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 ADCY7P51828 1080 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 AP3B2Q13367 1082 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 RABEP1Q15276 862 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 GTF3C6Q969F1 213 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 WDR11Q9BZH6 1224 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 SH3GLB2Q9NR46 395 aa18.25■□□□□ 0.51
UPF3A-208ENST00000484246 BAZ2BQ9UIF8 2168 aaKnown RBP18.25■□□□□ 0.51
UPF3A-208ENST00000484246 MYH6P13533 1939 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 FOSP01100 380 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-208ENST00000484246 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
UPF3A-208ENST00000484246 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
UPF3A-208ENST00000484246 STK3Q13188 491 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 TTLL4Q14679 1199 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 SNX17Q15036 470 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 ME3Q16798 604 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-208ENST00000484246 PCNX4Q63HM2 1172 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 MCTP2Q6DN12 878 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 CCDC148Q8NFR7 591 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-208ENST00000484246 BACH2Q9BYV9 841 aa18.24■□□□□ 0.51
UPF3A-208ENST00000484246 MYADML2A6NDP7 307 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 SMCO2A6NFE2 343 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 SPDYE3A6NKU9 549 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 RGS20O76081 388 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 LARGE1O95461 756 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 UBE2SQ16763 222 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 C1orf53Q5VUE5 145 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 KCNV1Q6PIU1 500 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 PCSK9Q8NBP7 692 aaKnown RBP18.23■□□□□ 0.51
UPF3A-208ENST00000484246 EMID1Q96A84 441 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-208ENST00000484246 EHMT1Q9H9B1 1298 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
UPF3A-208ENST00000484246 ARIH2O95376 493 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 CTDNEP1O95476 244 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 C6orf222P0C671 652 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-208ENST00000484246 TGFB3P10600 412 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 GNA11P29992 359 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 ICAM3P32942 547 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 MRPS9P82933 396 aaKnown RBP18.22■□□□□ 0.51
UPF3A-208ENST00000484246 FSCN1Q16658 493 aaKnown RBP18.22■□□□□ 0.51
UPF3A-208ENST00000484246 AP5M1Q9H0R1 490 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 PCDHA6Q9UN73 950 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 PCDHA8Q9Y5H6 950 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 MCM3APO60318 1980 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
UPF3A-208ENST00000484246 TXNP10599 105 aaKnown RBP18.21■□□□□ 0.51
UPF3A-208ENST00000484246 ACLYP53396 1101 aa18.21■□□□□ 0.51
UPF3A-208ENST00000484246 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
UPF3A-208ENST00000484246 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
UPF3A-208ENST00000484246 TMEM63BQ5T3F8 832 aa18.21■□□□□ 0.51
UPF3A-208ENST00000484246 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
UPF3A-208ENST00000484246 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
UPF3A-208ENST00000484246 DDX41Q9UJV9 622 aaKnown RBP18.21■□□□□ 0.51
UPF3A-208ENST00000484246 MKI67P46013 3256 aaKnown RBP18.21■□□□□ 0.51
UPF3A-208ENST00000484246 A0A1W2PQ45 241 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 A0A1W2PQY0 241 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 DYNC1LI2O43237 492 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 SREBF1P36956 1147 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 ARHGAP1Q07960 439 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 KCNA10Q16322 511 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 GALNT17Q6IS24 598 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 SEPT14Q6ZU15 432 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 REXO1Q8N1G1 1221 aaKnown RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 DAGLBQ8NCG7 672 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 NSUN7Q8NE18 718 aaKnown RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 CRYGNQ8WXF5 182 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 ANO3Q9BYT9 981 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 SH2B1Q9NRF2 756 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-208ENST00000484246 VPS54Q9P1Q0 977 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 ELP1O95163 1332 aa18.2■□□□□ 0.5
UPF3A-208ENST00000484246 A6NJR5 290 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 FIBPO43427 364 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 ZEB2O60315 1214 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 CABYRO75952 493 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 GH1P01241 217 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 CPT1AP50416 773 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-208ENST00000484246 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 GPRASP2Q96D09 838 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 SENP6Q9GZR1 1112 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-208ENST00000484246 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
UPF3A-208ENST00000484246 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 ST18O60284 1047 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 ASGR1P07306 291 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-208ENST00000484246 PTGS1P23219 599 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 SEMA3FQ13275 785 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 NPY5RQ15761 445 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms