RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 MYCLP12524 364 aaPredicted RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 PBX2P40425 430 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 LAMC2Q13753 1193 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 PGM5Q15124 567 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 DGKDQ16760 1214 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 VSIG10LQ86VR7 867 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 RETREG2Q8NC44 543 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 MAFAQ8NHW3 353 aaPredicted RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 VWCEQ96DN2 955 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 LSG1Q9H089 658 aaKnown RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 MYH6P13533 1939 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 PRC1O43663 620 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 RGS20O76081 388 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 PFKMP08237 780 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 FOSL2P15408 326 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 MCM5P33992 734 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 RFC2P35250 354 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 RAB30Q15771 203 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 KCNV1Q6PIU1 500 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
NUP50-215ENST00000484186 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
NUP50-215ENST00000484186 KAT2BQ92831 832 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 ESYT1Q9BSJ8 1104 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 NOD1Q9Y239 953 aa10.92□□□□□ -0.66
NUP50-215ENST00000484186 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 SLC27A2O14975 620 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 DDAH1O94760 285 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 IQCF3P0C7M6 154 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 TGFB3P10600 412 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 CCND2P30279 289 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 KIF5BP33176 963 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 BFSP2Q13515 415 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 PTGISQ16647 500 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 GDF6Q6KF10 455 aaPredicted RBP10.91□□□□□ -0.66
NUP50-215ENST00000484186 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 FCHSD1Q86WN1 690 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 PPTC7Q8NI37 304 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 PIBF1Q8WXW3 757 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 TMEM87BQ96K49 555 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 LZTS2Q9BRK4 669 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 SPZ1Q9BXG8 430 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
NUP50-215ENST00000484186 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
NUP50-215ENST00000484186 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 HAS3O00219 553 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 SH2B2O14492 632 aaPredicted RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 PPFIA4O75335 1185 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 GGPS1O95749 300 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 ACTN1P12814 892 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 LIFRP42702 1097 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 PSEN2P49810 448 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 GNAQP50148 359 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 SP2Q02086 613 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 CREB3L3Q68CJ9 461 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 C7orf31Q8N865 590 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 CAGE1Q8TC20 777 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 RRP36Q96EU6 259 aaKnown RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 CTAGE1Q96RT6 745 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 KATNAL1Q9BW62 490 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 ANO2Q9NQ90 1003 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 HDAC6Q9UBN7 1215 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 GTF2IRD1Q9UHL9 959 aa10.9□□□□□ -0.66
NUP50-215ENST00000484186 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
NUP50-215ENST00000484186 STAM2O75886 525 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 F2P00734 622 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 CALM1P0DP23 149 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 CALM2P0DP24 149 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 CALM3P0DP25 149 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 HOXD8P13378 290 aaPredicted RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 RABGGTBP53611 331 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 COL9A3Q14050 684 aaPredicted RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 MFSD10Q14728 455 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms