RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PTPDC1A2A3K4 754 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 HMGB1P1B2RPK0 211 aaPredicted RBP6.77□□□□□ -1.33
COPA-203ENST00000481040 ARNTLO00327 626 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 MEIS1O00470 390 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 ERC2O15083 957 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 MSCO60682 206 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 ALX3O95076 343 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 PRAMEF1O95521 474 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 CFBP00751 764 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 LTFP02788 710 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 KRT85P78386 507 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 GRM3Q14832 879 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 ODF1Q14990 250 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 FDX2Q6P4F2 183 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 CMTR2Q8IYT2 770 aaKnown RBP6.77□□□□□ -1.33
COPA-203ENST00000481040 PNISRQ8TF01 805 aaKnown RBP6.77□□□□□ -1.33
COPA-203ENST00000481040 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 GNL3LQ9NVN8 582 aaKnown RBP6.77□□□□□ -1.33
COPA-203ENST00000481040 MINPP1Q9UNW1 487 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 BACE2Q9Y5Z0 518 aa6.77□□□□□ -1.33
COPA-203ENST00000481040 ANO9A1A5B4 782 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 C2orf71A6NGG8 1288 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 AURKAO14965 403 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 GSNP06396 782 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 CD3EP07766 207 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 PHKG2P15735 406 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 LTBRP36941 435 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 ARHGAP29Q52LW3 1261 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 COBLL1Q53SF7 1204 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
COPA-203ENST00000481040 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
COPA-203ENST00000481040 OVCH1Q7RTY7 1134 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 CCDC103Q8IW40 242 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 HSPBAP1Q96EW2 488 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 LRGUKQ96M69 825 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 AIFM3Q96NN9 605 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 MKS1Q9NXB0 559 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 H2AFY2Q9P0M6 372 aaPredicted RBP6.76□□□□□ -1.33
COPA-203ENST00000481040 DAAM1Q9Y4D1 1078 aa6.76□□□□□ -1.33
COPA-203ENST00000481040 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
COPA-203ENST00000481040 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 APAF1O14727 1248 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 SOD2P04179 222 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 LCP1P13796 627 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 VCAM1P19320 739 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 RAB6AP20340 208 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 CYP7A1P22680 504 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 HTR3AP46098 478 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 DNM2P50570 870 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 SAFBQ15424 915 aaKnown RBP eCLIP6.75□□□□□ -1.33
COPA-203ENST00000481040 DDB1Q16531 1140 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 GRAMD1BQ3KR37 738 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 FAM47CQ5HY64 1035 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 IGF2-ASQ6U949 168 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.75□□□□□ -1.33
COPA-203ENST00000481040 STRBPQ96SI9 672 aaKnown RBP6.75□□□□□ -1.33
COPA-203ENST00000481040 NUP88Q99567 741 aaPredicted RBP6.75□□□□□ -1.33
COPA-203ENST00000481040 ZFP64Q9NPA5 681 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 OXSMQ9NWU1 459 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 DDX20Q9UHI6 824 aaKnown RBP6.75□□□□□ -1.33
COPA-203ENST00000481040 DAGLAQ9Y4D2 1042 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 MRFAP1Q9Y605 127 aa6.75□□□□□ -1.33
COPA-203ENST00000481040 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 WNT9AO14904 365 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA12O60330 932 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 WDHD1O75717 1129 aaPredicted RBP6.74□□□□□ -1.33
COPA-203ENST00000481040 IL33O95760 270 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 ASGR2P07307 311 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PLS3P13797 630 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
COPA-203ENST00000481040 CTSKP43235 329 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 NMIQ13287 307 aaPredicted RBP6.74□□□□□ -1.33
COPA-203ENST00000481040 KCNAB2Q13303 367 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 KIZQ2M2Z5 673 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 BROXQ5VW32 411 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 CRTC3Q6UUV7 619 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 MORC1Q86VD1 984 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 EFHBQ8N7U6 833 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PPM1EQ8WY54 764 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 DIO2Q92813 273 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 FBXW5Q969U6 566 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 TTC17Q96AE7 1141 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 SCYL1Q96KG9 808 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
COPA-203ENST00000481040 ASCC2Q9H1I8 757 aaPredicted RBP6.74□□□□□ -1.33
COPA-203ENST00000481040 PTPRHQ9HD43 1115 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 MAN1C1Q9NR34 630 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PNMA2Q9UL42 364 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 FAM50BQ9Y247 325 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 ZNF652Q9Y2D9 606 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA9Q9Y5G4 932 aaKnown RBP6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA8Q9Y5G5 932 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms