RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 INF2Q27J81 1249 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 STK32CQ86UX6 486 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 ZNF761Q86XN6 746 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 PLEKHO2Q8TD55 490 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 DPF3Q92784 378 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 COPS5Q92905 334 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 SEC16BQ96JE7 1060 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 MMP19Q99542 508 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 LNPKQ9C0E8 428 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 DNAJA1P31689 397 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 NCAPHQ15003 741 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 ZNF827Q17R98 1081 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 HHIPL2Q6UWX4 724 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 TRIM59Q8IWR1 403 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 FAM26EQ8N5C1 309 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 PALD1Q9ULE6 856 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 STRIP2Q9ULQ0 834 aa6.22□□□□□ -1.41
CDC42BPA-212ENST00000478573 INSRRP14616 1297 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 ATP2B1P20020 1258 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 RPL11P62913 178 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 PUM1Q14671 1186 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■□□□ 11.9
CDC42BPA-212ENST00000478573 ZXDCQ2QGD7 858 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 SV2CQ496J9 727 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 LARP1BQ659C4 914 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 MILR1Q7Z6M3 343 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 ZC3H18Q86VM9 953 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 MCF2L2Q86YR7 1114 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 ADAMTS17Q8TE56 1095 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 GPR20Q99678 358 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 YIPF4Q9BSR8 244 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 LRP2BPQ9P2M1 347 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
CDC42BPA-212ENST00000478573 SGSM2O43147 1006 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 ECI1P42126 302 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 ZNF143P52747 638 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 RGL3Q3MIN7 710 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 C6orf15Q6UXA7 325 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 SEC14L1Q92503 715 aa6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 C11orf84Q9BUA3 381 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-212ENST00000478573 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 TBX1O43435 398 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 SNRPB2P08579 225 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 THBS2P35442 1172 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 STAT5AP42229 794 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 KCNJ6P48051 423 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 MCTP2Q6DN12 878 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 CEP68Q76N32 757 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 DIO2Q92813 273 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 TRMT2BQ96GJ1 504 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 CHAMP1Q96JM3 812 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 MRGPRX3Q96LB0 322 aa6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 TIMM13Q9Y5L4 95 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-212ENST00000478573 LOC105371045A0A1W2PR82 267 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 B2RBV5 119 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 MEFVO15553 781 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 MYO1BO43795 1136 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 BCL6P41182 706 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 RBL2Q08999 1139 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 MIB1Q86YT6 1006 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 KYQ8NBH2 561 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 NPLOC4Q8TAT6 608 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 TMEM169Q96HH4 297 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 ACTR10Q9NZ32 417 aa6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 TMEFF2Q9UIK5 374 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 COA3Q9Y2R0 106 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-212ENST00000478573 DDAH1O94760 285 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 SSBP05455 408 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 ITGAVP06756 1048 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 RPL13P26373 211 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 ITGA1P56199 1179 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 CYP4F3Q08477 520 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 MROH9Q5TGP6 573 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 IQCEQ6IPM2 695 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 FAM124AQ86V42 546 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 ZNF227Q86WZ6 799 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 CCDC103Q8IW40 242 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 LOXL4Q96JB6 756 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 CNOT11Q9UKZ1 510 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-212ENST00000478573 DDX3XO00571 662 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 ITGB3P05106 788 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 HOXC12P31275 282 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 MAGEA10P43363 369 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 SLC6A11P48066 632 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 KCNAB2Q13303 367 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 NLRP10Q86W26 655 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 FAM178BQ8IXR5 827 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 FAM126BQ8IXS8 530 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms