RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 GJB6O95452 261 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 PLATP00750 562 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 ZNF20P17024 532 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 DDR2Q16832 855 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 DPY19L1Q2PZI1 675 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 NBPF6Q5VWK0 638 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 CPZQ66K79 652 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 WWC2Q6AWC2 1192 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 MRM1Q6IN84 353 aaKnown RBP3.97□□□□□ -1.77
CACUL1-202ENST00000477583 CPNE8Q86YQ8 564 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 TTC9BQ8N6N2 239 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 LINC00482Q8N8I6 264 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 NBPF4Q96M43 638 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 C8orf49Q96NF6 230 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 SAMD11Q96NU1 681 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 MTA3Q9BTC8 594 aa3.97□□□□□ -1.77
CACUL1-202ENST00000477583 C2orf71A6NGG8 1288 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 C1QTNF3-AMACRE9PGA6 284 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 U2SURPO15042 1029 aaKnown RBP3.96□□□□□ -1.78
CACUL1-202ENST00000477583 C8BP07358 591 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 PAMP19021 973 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 RBM10P98175 930 aaKnown RBP3.96□□□□□ -1.78
CACUL1-202ENST00000477583 SERINC3Q13530 473 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 NCAPHQ15003 741 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 RGL3Q3MIN7 710 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 TBC1D10BQ4KMP7 808 aaPredicted RBP3.96□□□□□ -1.78
CACUL1-202ENST00000477583 SOGA3Q5TF21 947 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 HEATR6Q6AI08 1181 aaKnown RBP3.96□□□□□ -1.78
CACUL1-202ENST00000477583 GORASP1Q9BQQ3 440 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 C1QTNF3Q9BXJ4 246 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 KLHL25Q9H0H3 589 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 SIRPGQ9P1W8 387 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 SRRDQ9UH36 339 aa3.96□□□□□ -1.78
CACUL1-202ENST00000477583 TRBV23OR9-2A0A075B6M9 112 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 NPHP3-ACAD11A0A0J9YXS1 232 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 CCDC85CA6NKD9 419 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 NPHS1O60500 1241 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 PPP1R11O60927 126 aaPredicted RBP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 PPM1BO75688 479 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 EPHX1P07099 455 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 RPL13P26373 211 aaKnown RBP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 THBS2P35442 1172 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 AMPD2Q01433 879 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 KIAA2012Q0VF49 1180 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 GRB10Q13322 594 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 CCDC144BQ3MJ40 725 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 FAM26FQ5R3K3 315 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 BORAQ6PGQ7 559 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 ETV3LQ6ZN32 361 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 DPH6Q7L8W6 267 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 ADAT2Q7Z6V5 191 aaKnown RBP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 DCP2Q8IU60 420 aaKnown RBP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 LGI4Q8N135 537 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 CHST13Q8NET6 341 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 FGD4Q96M96 766 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 OSBPL2Q9H1P3 480 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 PCDH18Q9HCL0 1135 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 CGGBP1Q9UFW8 167 aaPredicted RBP3.95□□□□□ -1.78
CACUL1-202ENST00000477583 MSRB2Q9Y3D2 182 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 SIT1Q9Y3P8 196 aa3.95□□□□□ -1.78
CACUL1-202ENST00000477583 C7orf72A4D263 438 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 ANKRD34BA5PLL1 514 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 SUV39H1O43463 412 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 SUSD5O60279 629 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 FSHBP01225 129 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 FUCA1P04066 466 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 NTRK1P04629 796 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 FAM124AQ86V42 546 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 SLC16A11Q8NCK7 471 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 C11orf84Q9BUA3 381 aaPredicted RBP3.94□□□□□ -1.78
CACUL1-202ENST00000477583 APEX2Q9UBZ4 518 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 INVSQ9Y283 1065 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 SUGT1Q9Y2Z0 365 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 ZNF536O15090 1300 aa3.94□□□□□ -1.78
CACUL1-202ENST00000477583 FAM221BA6H8Z2 402 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 MROH6A6NGR9 719 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 RASA3Q14644 834 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 BMS1Q14692 1282 aaKnown RBP3.93□□□□□ -1.78
CACUL1-202ENST00000477583 MCTP2Q6DN12 878 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 GLB1LQ6UWU2 654 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 CD300LDQ6UXZ3 194 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 EEPD1Q7L9B9 569 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 ZC3H18Q86VM9 953 aaKnown RBP3.93□□□□□ -1.78
CACUL1-202ENST00000477583 ZNF513Q8N8E2 541 aaPredicted RBP3.93□□□□□ -1.78
CACUL1-202ENST00000477583 KYQ8NBH2 561 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 MKL1Q969V6 931 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 RCC1LQ96I51 464 aaKnown RBP3.93□□□□□ -1.78
CACUL1-202ENST00000477583 DEPDC7Q96QD5 511 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 APBA2Q99767 749 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 SYT3Q9BQG1 590 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 CCDC113Q9H0I3 377 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 AP5M1Q9H0R1 490 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 ZSWIM4Q9H7M6 989 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 SNTG2Q9NY99 539 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 MARCH2Q9P0N8 246 aa3.93□□□□□ -1.78
CACUL1-202ENST00000477583 PDPK1O15530 556 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 NAT2P11245 290 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 C6P13671 934 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms