RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CCSER2Q9H7U1 834 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 VCX3AQ9NNX9 186 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SLC39A2Q9NP94 309 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 KCNQ5Q9NR82 932 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ENAMQ9NRM1 1142 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 TBCCD1Q9NVR7 557 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 GALNT8Q9NY28 637 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 CABP1Q9NZU7 370 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 VPS18Q9P253 973 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MBD2Q9UBB5 411 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 EFR3BQ9Y2G0 817 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 MAFBQ9Y5Q3 323 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 CLTCL1P53675 1640 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ABCA6Q8N139 1617 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MYO3AQ8NEV4 1616 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ABCC11Q96J66 1382 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 AK9Q5TCS8 1911 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MYO3BQ8WXR4 1341 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 DEPDC5O75140 1603 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 NUTM2FA1L443 756 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RASSF10A6NK89 507 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GNAT3A8MTJ3 354 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 LACTBL1A8MY62 500 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RSPH10B2B2RC85 870 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 INO80B-WBP1J3KQ70 363 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PSMD14O00487 310 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 WNT7AO00755 349 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PPEF1O14829 653 aaPredicted RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 HAT1O14929 419 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 SEMA3EO15041 775 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GNPATO15228 680 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ZSCAN12O43309 604 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 EXTL3O43909 919 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CBFA2T3O75081 653 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RNF40O75150 1001 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CDC45O75419 566 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GFPT2O94808 682 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 APBB3O95704 486 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 KRT14P02533 472 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CAPNS1P04632 268 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CYP17A1P05093 508 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RSPH10BP0C881 870 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GNAT1P11488 350 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 SLC5A1P13866 664 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CPA3P15088 417 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 IL10P22301 178 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ALDH3A1P30838 453 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 TRIM23P36406 574 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 STAT3P40763 770 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 HALP42357 657 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 LIFRP42702 1097 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 MASP1P48740 699 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 LIMK1P53667 647 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RAB15P59190 212 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ST5P78524 1137 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 MRPS25P82663 173 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ATP2B2Q01814 1243 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CYP4A11Q02928 519 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PUM3Q15397 648 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 INSCQ1MX18 579 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 SHROOM1Q2M3G4 852 aaPredicted RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 SGSM1Q2NKQ1 1148 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GRAMD1BQ3KR37 738 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CFAP70Q5T0N1 1121 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CYP4A22Q5TCH4 519 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 THEMIS2Q5TEJ8 643 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CRTC1Q6UUV9 634 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PI16Q6UXB8 463 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PHLDB2Q86SQ0 1253 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ZNF554Q86TJ5 538 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CAND1Q86VP6 1230 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 JAZF1Q86VZ6 243 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 NLRP10Q86W26 655 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CPXCR1Q8N123 301 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 TMEM57Q8N5G2 664 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 OR52K2Q8NGK3 314 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ZNF606Q8WXB4 792 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 GFM2Q969S9 779 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 ACSBG1Q96GR2 724 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RBM18Q96H35 190 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 HIC2Q96JB3 615 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CEP19Q96LK0 163 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PCMTD1Q96MG8 357 aaPredicted RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 COG8Q96MW5 612 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ALPK1Q96QP1 1244 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 LPIN3Q9BQK8 851 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 APOL5Q9BWW9 433 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 FAM129AQ9BZQ8 928 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 STMN4Q9H169 189 aaPredicted RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 CLSTN2Q9H4D0 955 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 DCTPP1Q9H773 170 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 DNAJC18Q9H819 358 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 PSTPIP2Q9H939 334 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 XAB2Q9HCS7 855 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 DMAP1Q9NPF5 467 aaPredicted RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 CHST12Q9NRB3 414 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 AATFQ9NY61 560 aaKnown RBP eCLIP4.22□□□□□ -1.73
LSM2-211ENST00000475835 RTEL1Q9NZ71 1219 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms