RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 INPP4AQ96PE3 977 aaPredicted RBP19.43■□□□□ 0.7
SCAF11-206ENST00000474828 C6orf50Q9HD87 102 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 PDGFCQ9NRA1 345 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
SCAF11-206ENST00000474828 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 CTAGE5O15320 804 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 PPFIA3O75145 1194 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 RARBP10826 455 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 COL6A1P12109 1028 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 CST5P28325 142 aaPredicted RBP19.42■□□□□ 0.7
SCAF11-206ENST00000474828 CNGA1P29973 690 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 ICAM3P32942 547 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 ADCYAP1R1P41586 468 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 GJA9P57773 515 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 CCSAPQ6IQ19 270 aaPredicted RBP19.42■□□□□ 0.7
SCAF11-206ENST00000474828 KLHDC9Q8NEP7 349 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 SCFD2Q8WU76 684 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 WASF1Q92558 559 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 TMX3Q96JJ7 454 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 AIFM3Q96NN9 605 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 PHF20Q9BVI0 1012 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 VPS54Q9P1Q0 977 aa19.42■□□□□ 0.7
SCAF11-206ENST00000474828 ORC3Q9UBD5 711 aaPredicted RBP19.42■□□□□ 0.7
SCAF11-206ENST00000474828 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.41■□□□□ 0.7
SCAF11-206ENST00000474828 JAK2O60674 1132 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 TGFB3P10600 412 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 SMPD1P17405 629 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 CCND2P30279 289 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 SREBF1P36956 1147 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 TNFAIP2Q03169 654 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 PCDHA4Q9UN74 947 aa19.41■□□□□ 0.7
SCAF11-206ENST00000474828 SPDYE3A6NKU9 549 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 DNM1LO00429 736 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 NKRFO15226 690 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCAF11-206ENST00000474828 TFRCP02786 760 aaKnown RBP19.4■□□□□ 0.7
SCAF11-206ENST00000474828 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
SCAF11-206ENST00000474828 KCNV1Q6PIU1 500 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 CCDC83Q8IWF9 413 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 REXO1Q8N1G1 1221 aaKnown RBP19.4■□□□□ 0.7
SCAF11-206ENST00000474828 ARRDC4Q8NCT1 418 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 WDR11Q9BZH6 1224 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 SYNRGQ9UMZ2 1314 aa19.4■□□□□ 0.7
SCAF11-206ENST00000474828 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.7
SCAF11-206ENST00000474828 ARIH2O95376 493 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 CYP3A4P08684 503 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 HMGN5P82970 282 aaKnown RBP19.39■□□□□ 0.69
SCAF11-206ENST00000474828 CUL4AQ13619 759 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 LRRC41Q15345 812 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 TMEM63BQ5T3F8 832 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 EEPD1Q7L9B9 569 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 EMID1Q96A84 441 aaPredicted RBP19.39■□□□□ 0.69
SCAF11-206ENST00000474828 TSEN34Q9BSV6 310 aaKnown RBP19.39■□□□□ 0.69
SCAF11-206ENST00000474828 ANO3Q9BYT9 981 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 XPNPEP3Q9NQH7 507 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 DDX41Q9UJV9 622 aaKnown RBP19.39■□□□□ 0.69
SCAF11-206ENST00000474828 UBIAD1Q9Y5Z9 338 aa19.39■□□□□ 0.69
SCAF11-206ENST00000474828 SPATA31C2B4DYI2 1134 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 EDIL3O43854 480 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 TTLL4Q14679 1199 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 SNX21Q969T3 373 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 ALG1Q9BT22 464 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 EHMT1Q9H9B1 1298 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 TMEM260Q9NX78 707 aa19.38■□□□□ 0.69
SCAF11-206ENST00000474828 MAFGO15525 162 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 XBP1P17861 261 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 ITGB5P18084 799 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 NLRP5P59047 1200 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 NIPA1Q7RTP0 329 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 BLIDQ8IZY5 108 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 LENG1Q96BZ8 264 aaPredicted RBP19.37■□□□□ 0.69
SCAF11-206ENST00000474828 GPRASP2Q96D09 838 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 PHF24Q9UPV7 400 aa19.37■□□□□ 0.69
SCAF11-206ENST00000474828 A6NJR5 290 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
SCAF11-206ENST00000474828 TXNP10599 105 aaKnown RBP19.36■□□□□ 0.69
SCAF11-206ENST00000474828 MYCLP12524 364 aaPredicted RBP19.36■□□□□ 0.69
SCAF11-206ENST00000474828 CIITAP33076 1130 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 ARHGAP1Q07960 439 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 ANO1Q5XXA6 986 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 RNF180Q86T96 592 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 TNFRSF25Q93038 417 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 SENP7Q9BQF6 1050 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 JADE2Q9NQC1 790 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 GJB4Q9NTQ9 266 aa19.36■□□□□ 0.69
SCAF11-206ENST00000474828 MEIS1O00470 390 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 FIBPO43427 364 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 DTNBO60941 627 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 PGK1P00558 417 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 HOXD8P13378 290 aaPredicted RBP19.35■□□□□ 0.69
SCAF11-206ENST00000474828 ARHGAP4P98171 946 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 JAKMIP3Q5VZ66 844 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 SEPT14Q6ZU15 432 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 TLK2Q86UE8 772 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 KCNJ14Q9UNX9 436 aa19.35■□□□□ 0.69
SCAF11-206ENST00000474828 DNAH12Q6ZR08 3092 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 IGLV3-22A0A075B6J6 115 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms