RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 MCM5P33992 734 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 PTPN11Q06124 597 aaPredicted RBP21.31■■□□□ 1
DNMT3A-210ENST00000474807 CREB3L3Q68CJ9 461 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 CASC1Q6TDU7 716 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 PPP1R13LQ8WUF5 828 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 EMID1Q96A84 441 aaPredicted RBP21.31■■□□□ 1
DNMT3A-210ENST00000474807 CDX2Q99626 313 aaPredicted RBP21.31■■□□□ 1
DNMT3A-210ENST00000474807 MYL10Q9BUA6 226 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 A0A0C4DFX4 3053 aa21.31■■□□□ 1
DNMT3A-210ENST00000474807 GCOM1H8Y6P7 765 aaPredicted RBP21.3■■□□□ 1
DNMT3A-210ENST00000474807 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
DNMT3A-210ENST00000474807 POLR2MP0CAP2 368 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 PGM5Q15124 567 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 FAM47CQ5HY64 1035 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 VSIG10LQ86VR7 867 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 HERVK_113Q902F9 699 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 VWCEQ96DN2 955 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 TMEM87BQ96K49 555 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 MRVI1Q9Y6F6 885 aa21.3■■□□□ 1
DNMT3A-210ENST00000474807 FGBP02675 491 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 MYCLP12524 364 aaPredicted RBP21.29■■□□□ 1
DNMT3A-210ENST00000474807 DNAJB2P25686 324 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 SMARCA1P28370 1054 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 TMTC2Q8N394 836 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 IL31RAQ8NI17 732 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 CTCFLQ8NI51 663 aaPredicted RBP21.29■■□□□ 1
DNMT3A-210ENST00000474807 KAT2BQ92831 832 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 SCLYQ96I15 445 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 SPZ1Q9BXG8 430 aa21.29■■□□□ 1
DNMT3A-210ENST00000474807 CASTP20810 708 aaKnown RBP21.28■■□□□ 1
DNMT3A-210ENST00000474807 KIF5BP33176 963 aa21.28■■□□□ 1
DNMT3A-210ENST00000474807 LIFRP42702 1097 aa21.28■■□□□ 1
DNMT3A-210ENST00000474807 LAMC2Q13753 1193 aa21.28■■□□□ 1
DNMT3A-210ENST00000474807 CXXC1Q9P0U4 656 aaPredicted RBP21.28■■□□□ 1
DNMT3A-210ENST00000474807 GRXCR1A8MXD5 290 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 DGKDQ16760 1214 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 KCNV1Q6PIU1 500 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 SESTD1Q86VW0 696 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 FCHSD1Q86WN1 690 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 RPUSD2Q8IZ73 545 aaKnown RBP21.27■■□□□ 1
DNMT3A-210ENST00000474807 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 LZTS2Q9BRK4 669 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 PBX4Q9BYU1 374 aa21.27■■□□□ 1
DNMT3A-210ENST00000474807 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 PLEKHA8P1O95397 391 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 CCND2P30279 289 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 NFXL1Q6ZNB6 911 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 OTOP2Q7RTS6 562 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 DHX37Q8IY37 1157 aaKnown RBP21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 SRBD1Q8N5C6 995 aaKnown RBP21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 PPTC7Q8NI37 304 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 TIFAQ96CG3 184 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 RRP36Q96EU6 259 aaKnown RBP21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
DNMT3A-210ENST00000474807 PITPNM1O00562 1244 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 HOXD8P13378 290 aaPredicted RBP21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 RXRAP19793 462 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 PBX2P40425 430 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 GNAQP50148 359 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 SP2Q02086 613 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 MYLIPQ8WY64 445 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 ZFP91Q96JP5 570 aaPredicted RBP21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 CTAGE1Q96RT6 745 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 LRRC2Q9BYS8 371 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 MTIF3Q9H2K0 278 aaKnown RBP21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 MYH7BA7E2Y1 1941 aa21.25■□□□□ 0.99
DNMT3A-210ENST00000474807 PFKMP08237 780 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CALM1P0DP23 149 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CALM2P0DP24 149 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CALM3P0DP25 149 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 TGFB3P10600 412 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CHMP4BP1P59074 171 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 MRPS9P82933 396 aaKnown RBP21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 GRIN2CQ14957 1233 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 PTGISQ16647 500 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CELF3Q5SZQ8 465 aaKnown RBP21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 GDF6Q6KF10 455 aaPredicted RBP21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 CMTR1Q8N1G2 835 aaKnown RBP21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 ZNF576Q9H609 170 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 PRUNE2Q8WUY3 3088 aa21.24■□□□□ 0.99
DNMT3A-210ENST00000474807 SCN5AQ14524 2016 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 F2P00734 622 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 IQCF3P0C7M6 154 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 UBA1P22314 1058 aaKnown RBP21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 HSDL1Q3SXM5 330 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 RNF20Q5VTR2 975 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 GTF2IRD1Q9UHL9 959 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 NOD1Q9Y239 953 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 SLC12A7Q9Y666 1083 aa21.23■□□□□ 0.99
DNMT3A-210ENST00000474807 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
DNMT3A-210ENST00000474807 HAS3O00219 553 aa21.22■□□□□ 0.99
DNMT3A-210ENST00000474807 PIK3CDO00329 1044 aa21.22■□□□□ 0.99
DNMT3A-210ENST00000474807 MEIS2O14770 477 aa21.22■□□□□ 0.99
DNMT3A-210ENST00000474807 PPFIA4O75335 1185 aa21.22■□□□□ 0.99
DNMT3A-210ENST00000474807 STAM2O75886 525 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms