RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 RBM12Q9NTZ6 932 aaKnown RBP11.91□□□□□ -0.5
LSS-208ENST00000474319 ITIH6Q6UXX5 1313 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 USO1O60763 962 aaKnown RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 IVLP07476 585 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 SNAP25P60880 206 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 TRIM14Q14142 442 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 TTC31Q49AM3 519 aaPredicted RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 KIAA0895Q8NCT3 520 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 MPHOSPH10O00566 681 aaKnown RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 SEMA3EO15041 775 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 LLGL1Q15334 1064 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
LSS-208ENST00000474319 MAATS1Q7Z4T9 603 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 MAD2L2Q9UI95 211 aa11.9□□□□□ -0.5
LSS-208ENST00000474319 LRRC10BA6NIK2 292 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 USP17L5A8MUK1 530 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.51
LSS-208ENST00000474319 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.51
LSS-208ENST00000474319 FBXW10Q5XX13 1052 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 C8orf74Q6P047 294 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 CCNI2Q6ZMN8 369 aaPredicted RBP11.9□□□□□ -0.51
LSS-208ENST00000474319 GPATCH11Q8N954 259 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 ZNF507Q8TCN5 953 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 CALML4Q96GE6 196 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 HYOU1Q9Y4L1 999 aa11.9□□□□□ -0.51
LSS-208ENST00000474319 TAF1P21675 1872 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 MYMKA6NI61 221 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 H0YIN7 160 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 PSMD14O00487 310 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 FAM153BP0C7A2 387 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 SRGNP10124 158 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 EPS15P42566 896 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 ZBED6P86452 979 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 FAM153CQ494X1 144 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 ELOA2Q8IYF1 753 aaPredicted RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 GIMAP8Q8ND71 665 aaPredicted RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 KRT12Q99456 494 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 SLC37A4O43826 429 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 CCNE1P24864 410 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
LSS-208ENST00000474319 NAA35Q5VZE5 725 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 SPATA4Q8NEY3 305 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 OR2W6PQ8NHA6 318 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 MTMR8Q96EF0 704 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 CCDC43Q96MW1 224 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 EYA3Q99504 573 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 PACSIN1Q9BY11 444 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 EPB41L5Q9HCM4 733 aa11.89□□□□□ -0.51
LSS-208ENST00000474319 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
LSS-208ENST00000474319 AGPSO00116 658 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 STXBP3O00186 592 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
LSS-208ENST00000474319 TM4SF1P30408 202 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 PAFAH1B1P43034 410 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 CARSP49589 748 aaKnown RBP11.88□□□□□ -0.51
LSS-208ENST00000474319 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
LSS-208ENST00000474319 TCERG1LQ5VWI1 586 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 ADAMTS1Q9UHI8 967 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 ANAPC4Q9UJX5 808 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
LSS-208ENST00000474319 H0YHG0 523 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.518e-8■□□□□ 11.2
LSS-208ENST00000474319 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
LSS-208ENST00000474319 MEIS1O00470 390 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 BAG6P46379 1132 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 VAV2P52735 878 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 CALCRLQ16602 461 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 MIIPQ5JXC2 388 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 FAM133AQ8N9E0 248 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 LSM14BQ9BX40 385 aaKnown RBP11.88□□□□□ -0.51
LSS-208ENST00000474319 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
LSS-208ENST00000474319 COL4A1P02462 1669 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms