RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CCDC178Q5BJE1 867 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 EMC10Q5UCC4 262 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-207ENST00000470763 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 RREB1Q92766 1687 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 PPP4R3AQ6IN85 833 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 GIMAP8Q8ND71 665 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-207ENST00000470763 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
NPHP4-207ENST00000470763 LPIN2Q92539 896 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 PYM1Q9BRP8 204 aaKnown RBP15.19■□□□□ 0.02
NPHP4-207ENST00000470763 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-207ENST00000470763 TMCO5BA8MYB1 307 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-207ENST00000470763 RAD51CO43502 376 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 MYZAPP0CAP1 466 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 CDK17Q00537 523 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 CRYMQ14894 314 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 MREGQ8N565 214 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 RASGRP4Q8TDF6 673 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 GGA2Q9UJY4 613 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 PPP1R12AO14974 1030 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-207ENST00000470763 FCER1AP12319 257 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 LRRC15Q8TF66 581 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 P2RX5Q93086 422 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 BAIAP2L1Q9UHR4 511 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 RTL9Q8NET4 1388 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 PHF20L1A8MW92 1017 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 TRAPPC3O43617 180 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 STK4Q13043 487 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 RASGRF1Q13972 1273 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
NPHP4-207ENST00000470763 DDX42Q86XP3 938 aaKnown RBP eCLIP15.18■□□□□ 0.02
NPHP4-207ENST00000470763 CACNA2D3Q8IZS8 1091 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 SLC12A6Q9UHW9 1150 aa15.18■□□□□ 0.02
NPHP4-207ENST00000470763 RHOBTB3O94955 611 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 PDE8BO95263 885 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CSF1RP07333 972 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-207ENST00000470763 HSD17B3P37058 310 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 PDE4DQ08499 809 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 BYSLQ13895 437 aaKnown RBP15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CDC37Q16543 378 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-207ENST00000470763 TDRD12Q587J7 1177 aaKnown RBP15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CATIPQ7Z7H3 387 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 ARFGAP2Q8N6H7 521 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CYP2D7A0A087X1C5 515 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 A0A1W2PQJ5 194 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 KCNQ2O43526 872 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 PALMO75781 387 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 PTPROQ16827 1216 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
NPHP4-207ENST00000470763 CCNE1P24864 410 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 CTNNA1P35221 906 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 LONP1P36776 959 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 KCNB1Q14721 858 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 ESR2Q92731 530 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 HVCN1Q96D96 273 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 UBA7P41226 1012 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 EHHADHQ08426 723 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 UAP1Q16222 522 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 RAPGEF5Q92565 580 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 ZNF512BQ96KM6 892 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 ATP6V0A4Q9HBG4 840 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 TIAM2Q8IVF5 1701 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 PDE6BP35913 854 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 HSPA9P38646 679 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 RCAN1P53805 252 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 CPLX4Q7Z7G2 160 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 SRBD1Q8N5C6 995 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
NPHP4-207ENST00000470763 ZSCAN10Q96SZ4 725 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 NOVA2Q9UNW9 492 aaKnown RBP15.16■□□□□ 0.02
NPHP4-207ENST00000470763 PLSCR1O15162 318 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 SLC8A1P32418 973 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 ZNF844Q08AG5 666 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 FMNL3Q8IVF7 1028 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 UBLCP1Q8WVY7 318 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 THOC1Q96FV9 657 aaKnown RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 DHTKD1Q96HY7 919 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms