RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 PALM3A6NDB9 673 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 ZNF233A6NK53 670 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 ATP1A2P50993 1020 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 GRB10Q13322 594 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 FBXW10Q5XX13 1052 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 KCNV1Q6PIU1 500 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 LRRC55Q6ZSA7 311 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 CCDC84Q86UT8 332 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 MARCH10Q8NA82 808 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 PIK3R5Q8WYR1 880 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 YY1AP1Q9H869 796 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 NFU1Q9UMS0 254 aa14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 COL14A1Q05707 1796 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-205ENST00000466780 SF3B2Q13435 895 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 GLE1Q53GS7 698 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 KRT25Q7Z3Z0 450 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 CCDC43Q96MW1 224 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 NOX5Q96PH1 765 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 NDUFAB1O14561 156 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 IFT20Q8IY31 132 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 PNMA5Q96PV4 448 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 ABCB11O95342 1321 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 DOT1LQ8TEK3 1739 aa14.37□□□□□ -0.11
PDZRN3-205ENST00000466780 INPP5BP32019 993 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 NAPAP54920 295 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 CFAP221Q4G0U5 840 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 UNC13DQ70J99 1090 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 SV2BQ7L1I2 683 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 DYMQ7RTS9 669 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 RNF10Q8N5U6 811 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 GLIS3Q8NEA6 775 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 TMEM47Q9BQJ4 181 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 KCNQ2O43526 872 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 TLR2O60603 784 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 HNRNPH1P31943 449 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 KCNQ4P56696 695 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 MCTP2Q6DN12 878 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 GUF1Q8N442 669 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 CALML4Q96GE6 196 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
PDZRN3-205ENST00000466780 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 ZPR1O75312 459 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 HIBADHP31937 336 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 APBA1Q02410 837 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TRADDQ15628 312 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 CFAP58Q5T655 872 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 KDM7AQ6ZMT4 941 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 IFT81Q8WYA0 676 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 PVALEFA0A1B0GWK0 134 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 A6NNZ2 444 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TXKP42681 527 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 DNA2P51530 1060 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 NAP1L1P55209 391 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 GUCY1A3Q02108 690 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TUBB8Q3ZCM7 444 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 CACNA2D4Q7Z3S7 1137 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TBCKQ8TEA7 893 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 CASKIN2Q8WXE0 1202 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 NLRC4Q9NPP4 1024 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 STX8Q9UNK0 236 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 ZEB2O60315 1214 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 PALMO75781 387 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 NOL4O94818 638 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 FTCDO95954 541 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TSPY3P0CV98 308 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TSPY8P0CW00 308 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 LSP1P33241 339 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 GUCY2FP51841 1108 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 LRRC63Q05C16 580 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 PAK2Q13177 524 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 LRRC41Q15345 812 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 SWT1Q5T5J6 900 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 EMC10Q5UCC4 262 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 MREGQ8N565 214 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 RNF14Q9UBS8 474 aa14.35□□□□□ -0.11
PDZRN3-205ENST00000466780 FNTAP49354 379 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 TXNRD3Q86VQ6 643 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 CNPY4Q8N129 248 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms