RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 VIL1P09327 827 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 ESRRAP11474 423 aaPredicted RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 PCP11498 1178 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 ZKSCAN1P17029 563 aaPredicted RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 CYP7A1P22680 504 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 MAPK1P28482 360 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 ANP32AP39687 249 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 MCM2P49736 904 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 MECOMQ03112 1051 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 KRT32Q14532 448 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 CREB3L3Q68CJ9 461 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 HHIPL2Q6UWX4 724 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 FBXL16Q8N461 479 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 MAGEB6Q8N7X4 407 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 CITED4Q96RK1 184 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 SEC62Q99442 399 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 RIOK1Q9BRS2 568 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 ATP8A2Q9NTI2 1148 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 RAI14Q9P0K7 980 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 ABCF2Q9UG63 623 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 DCTN4Q9UJW0 460 aa6.51□□□□□ -1.37
VPS41-211ENST00000466017 RBM8AQ9Y5S9 174 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 COL1A1P02452 1464 aaPredicted RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 BRCA1P38398 1863 aaKnown RBP6.51□□□□□ -1.37
VPS41-211ENST00000466017 GAKO14976 1311 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 MYO3BQ8WXR4 1341 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 CACNA1SQ13698 1873 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 M0R2C6 588 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 SLC27A2O14975 620 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 FOXP2O15409 715 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 ECE2O60344 883 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 FGAP02671 866 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 HMGB1P09429 215 aaKnown RBP6.5□□□□□ -1.37
VPS41-211ENST00000466017 PSMA5P28066 241 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 PRDX5P30044 214 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 IARSP41252 1262 aaKnown RBP6.5□□□□□ -1.37
VPS41-211ENST00000466017 SBK1Q52WX2 424 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 DACT2Q5SW24 774 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 OLFM4Q6UX06 510 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 Q6ZS46 218 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 ACAD11Q709F0 780 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 IFNL3Q8IZI9 196 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 ARMC10Q8N2F6 343 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 AGBL3Q8NEM8 1001 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 IPO9Q96P70 1041 aaKnown RBP6.5□□□□□ -1.37
VPS41-211ENST00000466017 MTA3Q9BTC8 594 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
VPS41-211ENST00000466017 ANAPC4Q9UJX5 808 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 ZNRF3Q9ULT6 936 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 SNX14Q9Y5W7 946 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 CHD4Q14839 1912 aa6.5□□□□□ -1.37
VPS41-211ENST00000466017 CCDC88AQ3V6T2 1871 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 GSG1L2A8MUP6 293 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 ZNF213O14771 459 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 TREHO43280 583 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 PPIP5K2O43314 1243 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 CHGBP05060 677 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 CYP21A2P08686 494 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 FGRP09769 529 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 ZNF157P51786 506 aaPredicted RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 CHAF1AQ13111 956 aaPredicted RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 IKBKEQ14164 716 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 GRM2Q14416 872 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 BECN1Q14457 450 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 AOC3Q16853 763 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 DUOXA2Q1HG44 320 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 MFSD14BQ5SR56 506 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 CCDC129Q6ZRS4 1044 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 SLC51AQ86UW1 340 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 DZIP1Q86YF9 867 aaKnown RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 GPR101Q96P66 508 aaPredicted RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 GMLQ99445 158 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 SYT17Q9BSW7 474 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 NRSN2Q9GZP1 204 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 TAOK3Q9H2K8 898 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 ABCB6Q9NP58 842 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 FER1L6Q2WGJ9 1857 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
VPS41-211ENST00000466017 MROH7-TTC4A0A0A0MT08 1334 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 WDR19Q8NEZ3 1342 aa6.49□□□□□ -1.37
VPS41-211ENST00000466017 MYH13Q9UKX3 1938 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 ARFGEF1Q9Y6D6 1849 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 YDJCA8MPS7 323 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 FZD9O00144 591 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 MBD4O95243 580 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 KCNA1Q09470 495 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 IMMTQ16891 758 aaKnown RBP6.48□□□□□ -1.37
VPS41-211ENST00000466017 PRSS36Q5K4E3 855 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 VPS53Q5VIR6 699 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 RUFY3Q7L099 469 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 ADGRA1Q86SQ6 560 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 NIM1KQ8IY84 436 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 LCORLQ8N3X6 602 aa6.48□□□□□ -1.37
VPS41-211ENST00000466017 CERS5Q8N5B7 392 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 342.4 ms