RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TMEM31Q5JXX7 168 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 LRRC8DQ7L1W4 858 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 KAT2BQ92831 832 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CNOT4-208ENST00000465721 A0A0D9SFI3 127 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 NBNO60934 754 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 FGAP02671 866 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 SELPP16109 830 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 CD320Q9NPF0 282 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
CNOT4-208ENST00000465721 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 FAM86C2PA6NEL3 165 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 GJB5O95377 273 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 CHMP4BP1P59074 171 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 USH1GQ495M9 461 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 FAM227BQ96M60 508 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 CPVLQ9H3G5 476 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 HELLSQ9NRZ9 838 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 COL20A1Q9P218 1284 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 GTF2IRD1Q9UHL9 959 aa13.82□□□□□ -0.2
CNOT4-208ENST00000465721 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 B4DLN1 442 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 GPR37L1O60883 481 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 GH1P01241 217 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 CKBP12277 381 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 HAND2P61296 217 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 ERVK-21P61565 698 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 SYTL5Q8TDW5 730 aaPredicted RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 WNT8BQ93098 351 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 EVI5LQ96CN4 794 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 TGS1Q96RS0 853 aaKnown RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 UBE2ZQ9H832 354 aaPredicted RBP13.81□□□□□ -0.2
CNOT4-208ENST00000465721 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 MTUS1Q9ULD2 1270 aa13.81□□□□□ -0.2
CNOT4-208ENST00000465721 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 F2P00734 622 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
CNOT4-208ENST00000465721 MBTPS1Q14703 1052 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
CNOT4-208ENST00000465721 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-208ENST00000465721 TTC14Q96N46 770 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 RAD9AQ99638 391 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 MAF1Q9H063 256 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 HDAC6Q9UBN7 1215 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 NEDD4P46934 1319 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
CNOT4-208ENST00000465721 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-208ENST00000465721 PI4K2BG5E9Z4 385 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 HAS3O00219 553 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 ZNF286BP0CG31 522 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
CNOT4-208ENST00000465721 PSEN2P49810 448 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-208ENST00000465721 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
CNOT4-208ENST00000465721 CHST3Q7LGC8 479 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 ABCB11O95342 1321 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
CNOT4-208ENST00000465721 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 EFCAB14O75071 495 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
CNOT4-208ENST00000465721 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
CNOT4-208ENST00000465721 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
CNOT4-208ENST00000465721 PTK7Q13308 1070 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 DGKDQ16760 1214 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 PPTC7Q8NI37 304 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
CNOT4-208ENST00000465721 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
CNOT4-208ENST00000465721 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
CNOT4-208ENST00000465721 PDE1AP54750 535 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 IKBKEQ14164 716 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 HIC1Q14526 733 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 MFSD10Q14728 455 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 STXBP2Q15833 593 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 LEXMQ3ZCV2 418 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
CNOT4-208ENST00000465721 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms