RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 MMP3P08254 477 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 SMARCA1P28370 1054 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 CCND2P30279 289 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 EPHB4P54760 987 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 LY6KQ17RY6 165 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 ALDH8A1Q9H2A2 487 aaPredicted RBP11.75□□□□□ -0.53
SF3A3-204ENST00000462258 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
SF3A3-204ENST00000462258 KPNA6O60684 536 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 PPIGQ13427 754 aaKnown RBP eCLIP11.74□□□□□ -0.53
SF3A3-204ENST00000462258 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 FAM47CQ5HY64 1035 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 DHX32Q7L7V1 743 aaKnown RBP11.74□□□□□ -0.53
SF3A3-204ENST00000462258 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
SF3A3-204ENST00000462258 DDX41Q9UJV9 622 aaKnown RBP11.74□□□□□ -0.53
SF3A3-204ENST00000462258 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 GBF1Q92538 1859 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
SF3A3-204ENST00000462258 ZBTB43O43298 467 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 RGS20O76081 388 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 REC8O95072 547 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 CSF2RAP15509 400 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 UBA1P22314 1058 aaKnown RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 CYP2C18P33260 490 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 HSPA4P34932 840 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 RTN1Q16799 776 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 UMODL1Q5DID0 1318 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 Q7L0L9 218 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 VSIG10LQ86VR7 867 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 DEFB123Q8N688 67 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 CUL5Q93034 780 aa11.73□□□□□ -0.53
SF3A3-204ENST00000462258 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 NOC4LQ9BVI4 516 aaKnown RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
SF3A3-204ENST00000462258 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 GOLGA8AA7E2F4 631 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 GOLGA8BA8MQT2 603 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 PIK3CDO00329 1044 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 FGD1P98174 961 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 DGKDQ16760 1214 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 KCNV1Q6PIU1 500 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 HEATR3Q7Z4Q2 680 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
SF3A3-204ENST00000462258 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.53
SF3A3-204ENST00000462258 KCNB2Q92953 911 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
SF3A3-204ENST00000462258 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
SF3A3-204ENST00000462258 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.532e-7■■■■□ 20.3
SF3A3-204ENST00000462258 BRPF3Q9ULD4 1205 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 SNX14Q9Y5W7 946 aa11.72□□□□□ -0.53
SF3A3-204ENST00000462258 NID2Q14112 1375 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 MEIS2O14770 477 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 SORBS3O60504 671 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 STAM2O75886 525 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 GGPS1O95749 300 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 F2P00734 622 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 ZNF286BP0CG31 522 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 CYP2C9P11712 490 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 CPA1P15085 419 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 CASTP20810 708 aaKnown RBP11.71□□□□□ -0.53
SF3A3-204ENST00000462258 RCAN1P53805 252 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 SMAD3P84022 425 aaKnown RBP11.71□□□□□ -0.53
SF3A3-204ENST00000462258 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
SF3A3-204ENST00000462258 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.53
SF3A3-204ENST00000462258 KATNAL1Q9BW62 490 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 WNT8AQ9H1J5 351 aa11.71□□□□□ -0.53
SF3A3-204ENST00000462258 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
SF3A3-204ENST00000462258 FIBPO43427 364 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 ACRP10323 421 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms