RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PCNX4Q63HM2 1172 aa32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 ARRDC4Q8NCT1 418 aa32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 SCFD2Q8WU76 684 aa32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 LLPHQ9BRT6 129 aaKnown RBP32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 ADAMTS4O75173 837 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 RGS20O76081 388 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 AP3B2Q13367 1082 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 DUSP28Q4G0W2 176 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 XRRA1Q6P2D8 792 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 WASF1Q92558 559 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 TMEM260Q9NX78 707 aa32.06■■■□□ 2.72
SMARCC1-203ENST00000454240 SYNRGQ9UMZ2 1314 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 STAM2O75886 525 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 FARP2O94887 1054 aaPredicted RBP32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 PGK1P00558 417 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 NLRP5P59047 1200 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 LRRC41Q15345 812 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 SEPT14Q6ZU15 432 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 BICD2Q8TD16 824 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 UPF3AQ9H1J1 476 aaKnown RBP32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 Q9Y3F1 56 aa32.05■■■□□ 2.72
SMARCC1-203ENST00000454240 GJA9P57773 515 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 NKX3-2P78367 333 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 TTLL4Q14679 1199 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 MCTP2Q6DN12 878 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 CCDC62Q6P9F0 684 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 REXO1Q8N1G1 1221 aaKnown RBP32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 TMX3Q96JJ7 454 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 ZFP91Q96JP5 570 aaPredicted RBP32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 EHMT1Q9H9B1 1298 aa32.04■■■□□ 2.72
SMARCC1-203ENST00000454240 DNM1LO00429 736 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 ARIH2O95376 493 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 GJC2Q5T442 439 aaPredicted RBP32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 JAKMIP3Q5VZ66 844 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 KLHDC9Q8NEP7 349 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 DIS3LQ8TF46 1054 aaKnown RBP32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 PAWRQ96IZ0 340 aaKnown RBP32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 PGBD1Q96JS3 809 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 ALG1Q9BT22 464 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 ANO3Q9BYT9 981 aa32.03■■■□□ 2.72
SMARCC1-203ENST00000454240 MYH7BA7E2Y1 1941 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 NKRFO15226 690 aaKnown RBP eCLIP32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 TXNP10599 105 aaKnown RBP32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 XBP1P17861 261 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 PTGS1P23219 599 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 NPY5RQ15761 445 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 GALNT17Q6IS24 598 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 RNF180Q86T96 592 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 TLK2Q86UE8 772 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 INPP4AQ96PE3 977 aaPredicted RBP32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 PHF20Q9BVI0 1012 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 PCDHA4Q9UN74 947 aa32.02■■■□□ 2.72
SMARCC1-203ENST00000454240 DAGLBQ8NCG7 672 aa32.01■■■□□ 2.71
SMARCC1-203ENST00000454240 SPC25Q9HBM1 224 aa32.01■■■□□ 2.71
SMARCC1-203ENST00000454240 RTEL1Q9NZ71 1219 aa32.01■■■□□ 2.71
SMARCC1-203ENST00000454240 DDX41Q9UJV9 622 aaKnown RBP32.01■■■□□ 2.71
SMARCC1-203ENST00000454240 CTAGE5O15320 804 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 DYNC1LI2O43237 492 aaPredicted RBP32■■■□□ 2.71
SMARCC1-203ENST00000454240 COL6A1P12109 1028 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 CST5P28325 142 aaPredicted RBP32■■■□□ 2.71
SMARCC1-203ENST00000454240 SREBF1P36956 1147 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 IRX5P78411 483 aaPredicted RBP32■■■□□ 2.71
SMARCC1-203ENST00000454240 CCSAPQ6IQ19 270 aaPredicted RBP32■■■□□ 2.71
SMARCC1-203ENST00000454240 KCNV1Q6PIU1 500 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 NECAB2Q7Z6G3 386 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 GJB4Q9NTQ9 266 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 KCNJ14Q9UNX9 436 aa32■■■□□ 2.71
SMARCC1-203ENST00000454240 MYADML2A6NDP7 307 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 M0R2N6 131 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 C6orf222P0C671 652 aaPredicted RBP31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 ICAM3P32942 547 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 LY6KQ17RY6 165 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 BLIDQ8IZY5 108 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 RASGRP4Q8TDF6 673 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 AP5M1Q9H0R1 490 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 MRVI1Q9Y6F6 885 aa31.99■■■□□ 2.71
SMARCC1-203ENST00000454240 KBTBD13C9JR72 458 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 MYCNP04198 464 aaPredicted RBP31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 TGFB3P10600 412 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 GNPTABQ3T906 1256 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 CRYGNQ8WXF5 182 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 COPS5Q92905 334 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 TSEN34Q9BSV6 310 aaKnown RBP31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 C11orf49Q9H6J7 331 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 UBIAD1Q9Y5Z9 338 aa31.98■■■□□ 2.71
SMARCC1-203ENST00000454240 HMGN5P82970 282 aaKnown RBP31.97■■■□□ 2.71
SMARCC1-203ENST00000454240 SPATA31C2B4DYI2 1134 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 ITGB5P18084 799 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 ARHGAP4P98171 946 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 SEMA3FQ13275 785 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 GNASQ5JWF2 1037 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 PHF24Q9UPV7 400 aa31.96■■■□□ 2.71
SMARCC1-203ENST00000454240 FIBPO43427 364 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 SP2Q02086 613 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 KCNA10Q16322 511 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 NLRX1Q86UT6 975 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 OR6J1Q8NGC5 347 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 GPRASP2Q96D09 838 aa31.95■■■□□ 2.71
SMARCC1-203ENST00000454240 GH1P01241 217 aa31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 CYP3A4P08684 503 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms