RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 CTCFLQ8NI51 663 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CXorf38Q8TB03 319 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 C17orf50Q8WW18 174 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 WNT8BQ93098 351 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 TMX3Q96JJ7 454 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 PAGR1Q9BTK6 254 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 IER2Q9BTL4 223 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 TRIM7Q9C029 511 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC86Q9H6F5 360 aaKnown RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 BATF3Q9NR55 127 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CPSF2Q9P2I0 782 aaKnown RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADAM21Q9UKJ8 722 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 BARX2Q9UMQ3 279 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 TMEM98Q9Y2Y6 226 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZDHHC9Q9Y397 364 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 KDM6BO15054 1643 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SMARCA4P51532 1647 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADGBQ8N7X0 1667 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 MSH6P52701 1360 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYOM2P54296 1465 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 F8VZ95 297 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 LIN7AO14910 233 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC27A2O14975 620 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 SHOX2O60902 331 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 RFPL3O75679 317 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 NEBLO76041 1014 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FSBPO95073 299 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF24P17028 368 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLCG1P19174 1290 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PAX3P23760 479 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 MAOBP27338 520 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 OAS2P29728 719 aaKnown RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 HOXA10P31260 410 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 GCLCP48506 637 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 CDKN1CP49918 316 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PSMC1P62191 440 aaKnown RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 GNAI1P63096 354 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PIP4K2BP78356 416 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC7A5Q01650 507 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PDE4BQ07343 736 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC15Q0P6D6 951 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 C19orf57Q0VDD7 668 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PABPC4Q13310 644 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 POU4F3Q15319 338 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ELF2Q15723 593 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FOXD4L6Q3SYB3 417 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLEKHO1Q53GL0 409 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PRRT3Q5FWE3 981 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ACBD5Q5T8D3 534 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PSAPL1Q6NUJ1 521 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 KIAA1211LQ6NV74 962 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FOXD4L3Q6VB84 417 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FERMT3Q86UX7 667 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 LRRC47Q8N1G4 583 aaKnown RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 RNF214Q8ND24 703 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 C3orf20Q8ND61 904 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 GIMAP7Q8NHV1 300 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 SMCR8Q8TEV9 937 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC7A3Q8WY07 619 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZKSCAN4Q969J2 545 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 MFSD3Q96ES6 412 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ACSBG1Q96GR2 724 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 CORO1BQ9BR76 489 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FAM126AQ9BYI3 521 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 RMI1Q9H9A7 625 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ATP6V0A4Q9HBG4 840 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PCDHB10Q9UN67 800 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 G3BP2Q9UN86 482 aaKnown RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 FAN1Q9Y2M0 1017 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 ATP8A1Q9Y2Q0 1164 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 USP47Q96K76 1375 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 PIK3C2GO75747 1445 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 YTHDC2Q9H6S0 1430 aaKnown RBP4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 WDR62O43379 1518 aa4.11□□□□□ -1.75
HMGB3P8-201ENST00000449709 IQGAP2Q13576 1575 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYOM1P52179 1685 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 LRRIQ1Q96JM4 1722 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 A0A087X0B3 334 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 A0A1B0GUA9 196 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 IQCA1LA6NCM1 817 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 LRRC10BA6NIK2 292 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 SPDYE3A6NKU9 549 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CHURC1-FNTBB4DL54 471 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 PES1O00541 588 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ERC2O15083 957 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 AP5Z1O43299 807 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 NEMFO60524 1076 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RGS9O75916 674 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 APBA3O96018 575 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYL1P05976 194 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 PYGLP06737 847 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CTSBP07858 339 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 HARSP12081 509 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYCLP1P12525 358 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RPL13P26373 211 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 STAT3P40763 770 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ARL4DP49703 201 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 EVA1CP58658 441 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms