RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 NOL8Q76FK4 1167 aaKnown RBP8.79□□□□□ -1
RBM39-218ENST00000449489 CLEC10AQ8IUN9 316 aa8.79□□□□□ -1
RBM39-218ENST00000449489 RETREG2Q8NC44 543 aa8.79□□□□□ -1
RBM39-218ENST00000449489 PRSS33Q8NF86 280 aa8.79□□□□□ -1
RBM39-218ENST00000449489 ATP8A2Q9NTI2 1148 aa8.79□□□□□ -1
RBM39-218ENST00000449489 TRMT13Q9NUP7 481 aaKnown RBP8.79□□□□□ -1
RBM39-218ENST00000449489 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
RBM39-218ENST00000449489 GREB1LQ9C091 1923 aaPredicted RBP8.78□□□□□ -1
RBM39-218ENST00000449489 LOC102724159A0A0B4J2E5 919 aa8.78□□□□□ -1
RBM39-218ENST00000449489 LCHNA4D1U4 455 aa8.78□□□□□ -1
RBM39-218ENST00000449489 NCK2O43639 380 aa8.78□□□□□ -1
RBM39-218ENST00000449489 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 EFCAB14O75071 495 aa8.78□□□□□ -1
RBM39-218ENST00000449489 GJB5O95377 273 aa8.78□□□□□ -1
RBM39-218ENST00000449489 CDK8P49336 464 aa8.78□□□□□ -1
RBM39-218ENST00000449489 WDR5P61964 334 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 PSMC6P62333 389 aa8.78□□□□□ -1
RBM39-218ENST00000449489 PWP2Q15269 919 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 QPCTQ16769 361 aa8.78□□□□□ -1
RBM39-218ENST00000449489 C12orf60Q5U649 245 aa8.78□□□□□ -1
RBM39-218ENST00000449489 TAPT1Q6NXT6 567 aa8.78□□□□□ -1
RBM39-218ENST00000449489 ERMP1Q7Z2K6 904 aa8.78□□□□□ -1
RBM39-218ENST00000449489 SPRED2Q7Z698 418 aa8.78□□□□□ -1
RBM39-218ENST00000449489 MORC4Q8TE76 937 aa8.78□□□□□ -1
RBM39-218ENST00000449489 SSH3Q8TE77 659 aa8.78□□□□□ -1
RBM39-218ENST00000449489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.78□□□□□ -1
RBM39-218ENST00000449489 EDAQ92838 391 aa8.78□□□□□ -1
RBM39-218ENST00000449489 WNT2BQ93097 391 aa8.78□□□□□ -1
RBM39-218ENST00000449489 PABPC5Q96DU9 382 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 MRPL38Q96DV4 380 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 POP1Q99575 1024 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 FTOQ9C0B1 505 aaKnown RBP eCLIP8.78□□□□□ -11e-8■□□□□ 10.4
RBM39-218ENST00000449489 VTA1Q9NP79 307 aa8.78□□□□□ -1
RBM39-218ENST00000449489 NYAP2Q9P242 653 aa8.78□□□□□ -1
RBM39-218ENST00000449489 NOP58Q9Y2X3 529 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 ZFHX4Q86UP3 3567 aa8.78□□□□□ -1
RBM39-218ENST00000449489 BAZ2AQ9UIF9 1905 aaKnown RBP8.78□□□□□ -1
RBM39-218ENST00000449489 ABHD14A-ACY1A0A1B0GW23 586 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 LINC01553A4QN01 128 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 F5H6K3 240 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 KPNA6O60684 536 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 CXCL10P02778 98 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 CYP2D6P10635 497 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 CPT1AP50416 773 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 PURAQ00577 322 aaKnown RBP8.77□□□□□ -1.01
RBM39-218ENST00000449489 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 KLRC3Q07444 240 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 PTPROQ16827 1216 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 DUSP28Q4G0W2 176 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 TIGD5Q53EQ6 642 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 SLC9C2Q5TAH2 1124 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 TRMT2AQ8IZ69 625 aaKnown RBP8.77□□□□□ -1.01
RBM39-218ENST00000449489 CAGE1Q8TC20 777 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 AFAP1L1Q8TED9 768 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
RBM39-218ENST00000449489 DYNLL2Q96FJ2 89 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 SAMD11Q96NU1 681 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 MTG1Q9BT17 334 aaPredicted RBP8.77□□□□□ -1.01
RBM39-218ENST00000449489 ANTXR1Q9H6X2 564 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 ACAD9Q9H845 621 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
RBM39-218ENST00000449489 FEM1BQ9UK73 627 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
RBM39-218ENST00000449489 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 TCRBV5S4A2TA0A5A2 114 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 PROB1E7EW31 1015 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 GFRA3O60609 400 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 AP1G2O75843 785 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 PDE6AP16499 860 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 IRS1P35568 1242 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 RBL2Q08999 1139 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 TCF15Q12870 199 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 BRDTQ58F21 947 aaPredicted RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 CNKSR3Q6P9H4 555 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 RPAP2Q8IXW5 612 aaPredicted RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 CPXCR1Q8N123 301 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 MKL1Q969V6 931 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 EAF2Q96CJ1 260 aaPredicted RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 A1CFQ9NQ94 594 aaKnown RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 COG6Q9Y2V7 657 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 INSL6Q9Y581 213 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 CTDP1Q9Y5B0 961 aaPredicted RBP8.76□□□□□ -1.01
RBM39-218ENST00000449489 MICAL3Q7RTP6 2002 aa8.76□□□□□ -1.01
RBM39-218ENST00000449489 ANKRD11Q6UB99 2663 aaPredicted RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 SPTBN2O15020 2390 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 H3BQ06 376 aaPredicted RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 SURF6O75683 361 aaKnown RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 NDUFB10O96000 172 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 ATP8B2P98198 1209 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 OS9Q13438 667 aaPredicted RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 GPNMBQ14956 572 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 NBPF20Q3BBV1 942 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 LCORLQ8N3X6 602 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms