RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 AK8Q96MA6 479 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 PCDHA12Q9UN75 941 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 ESYT2A0FGR8 921 aa16.52■□□□□ 0.24
SF1-211ENST00000448404 CCNE1P24864 410 aa16.52■□□□□ 0.24
SF1-211ENST00000448404 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.24
SF1-211ENST00000448404 KRT79Q5XKE5 535 aa16.52■□□□□ 0.24
SF1-211ENST00000448404 GLIS2Q9BZE0 524 aaPredicted RBP16.52■□□□□ 0.24
SF1-211ENST00000448404 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
SF1-211ENST00000448404 MRFAP1Q9Y605 127 aa16.52■□□□□ 0.24
SF1-211ENST00000448404 CCP110O43303 1012 aa16.52■□□□□ 0.23
SF1-211ENST00000448404 SRGAP2O75044 1071 aa16.52■□□□□ 0.23
SF1-211ENST00000448404 MAP3K9P80192 1104 aa16.52■□□□□ 0.23
SF1-211ENST00000448404 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.23
SF1-211ENST00000448404 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.23
SF1-211ENST00000448404 RAD54LQ92698 747 aa16.52■□□□□ 0.23
SF1-211ENST00000448404 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.23
SF1-211ENST00000448404 LRRC37AA6NMS7 1700 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 MEIS2O14770 477 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 TMEM266Q2M3C6 531 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 KIF4BQ2VIQ3 1234 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 TMC4Q7Z404 712 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 ANO3Q9BYT9 981 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 MYH7BA7E2Y1 1941 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 PLSCR1O15162 318 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 MED24O75448 989 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 TPM1P09493 284 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 SPAG1Q07617 926 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
SF1-211ENST00000448404 NCAPH2Q6IBW4 605 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 LACRTQ9GZZ8 138 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
SF1-211ENST00000448404 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 FAM86B1E9PN63 330 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 ZBTB39O15060 712 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 FAM86B2P0C5J1 330 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 DDX41Q9UJV9 622 aaKnown RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 EPN1Q9Y6I3 576 aaPredicted RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 MYH4Q9Y623 1939 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 NDUFA10O95299 355 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 POLD1P28340 1107 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.234e-18■■□□□ 13.9
SF1-211ENST00000448404 HERVK_113P62684 666 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 KCTD19Q17RG1 926 aaPredicted RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 CT47A1Q5JQC4 288 aaPredicted RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
SF1-211ENST00000448404 SUGT1Q9Y2Z0 365 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
SF1-211ENST00000448404 KIF5CO60282 957 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.233e-10■■■■■ 38.5
SF1-211ENST00000448404 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 THAP9Q9H5L6 903 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 SFI1A8K8P3 1242 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 OPLAHO14841 1288 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 H2AFXP16104 143 aaPredicted RBP16.49■□□□□ 0.23
SF1-211ENST00000448404 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 CASP5P51878 434 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 OR8K1Q8NGG5 319 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 DHTKD1Q96HY7 919 aaPredicted RBP16.49■□□□□ 0.23
SF1-211ENST00000448404 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 TMEM39BQ9GZU3 492 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 FBXO28Q9NVF7 368 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 CHMP2AO43633 222 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 ANKRD13CQ8N6S4 541 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 DRC1Q96MC2 740 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
SF1-211ENST00000448404 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
SF1-211ENST00000448404 MACROD2A1Z1Q3 448 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 RHOXF2BP0C7M4 288 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
SF1-211ENST00000448404 MRPS25P82663 173 aaKnown RBP16.48■□□□□ 0.23
SF1-211ENST00000448404 COASYQ13057 564 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 DEFB132Q7Z7B7 95 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 TMTC1Q8IUR5 882 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 RHOXF2Q9BQY4 288 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 RGL1Q9NZL6 768 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
SF1-211ENST00000448404 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 UNC13DQ70J99 1090 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 C7orf43Q8WVR3 580 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 CAPZA3Q96KX2 299 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 FEZ1Q99689 392 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
SF1-211ENST00000448404 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms