RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 DDX41Q9UJV9 622 aaKnown RBP18.03■□□□□ 0.48
HMGB2-203ENST00000446922 SLC27A2O14975 620 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 PRC1O43663 620 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 STAM2O75886 525 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 EIF2AK2P19525 551 aaKnown RBP18.02■□□□□ 0.48
HMGB2-203ENST00000446922 ARHGAP1Q07960 439 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 LY6KQ17RY6 165 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 RNF20Q5VTR2 975 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 ZNF365Q70YC5 407 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 CHST3Q7LGC8 479 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 SESTD1Q86VW0 696 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 SLC17A8Q8NDX2 589 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 COPS5Q92905 334 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 GUCD1Q96NT3 240 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
HMGB2-203ENST00000446922 SCN10AQ9Y5Y9 1956 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 PITPNM1O00562 1244 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 RFC2P35250 354 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 PGM5Q15124 567 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 DGKDQ16760 1214 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 CREB3L3Q68CJ9 461 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 HOMER1Q86YM7 354 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
HMGB2-203ENST00000446922 KIAA1217Q5T5P2 1943 aa18.01■□□□□ 0.47
HMGB2-203ENST00000446922 CCDC69A6NI79 296 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 PPFIA4O75335 1185 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 MMP3P08254 477 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 CCND2P30279 289 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
HMGB2-203ENST00000446922 PPTC7Q8NI37 304 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 AFG1LQ8WV93 481 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 KATNAL1Q9BW62 490 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 MRVI1Q9Y6F6 885 aa18■□□□□ 0.47
HMGB2-203ENST00000446922 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
HMGB2-203ENST00000446922 HOXD8P13378 290 aaPredicted RBP17.99■□□□□ 0.47
HMGB2-203ENST00000446922 DNAJB2P25686 324 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 BFSP2Q13515 415 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 XRRA1Q6P2D8 792 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 SGMS1Q86VZ5 419 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 TEX2Q8IWB9 1127 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 CDX2Q99626 313 aaPredicted RBP17.99■□□□□ 0.47
HMGB2-203ENST00000446922 WNT8AQ9H1J5 351 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 TTYH1Q9H313 450 aaPredicted RBP17.99■□□□□ 0.47
HMGB2-203ENST00000446922 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
HMGB2-203ENST00000446922 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
HMGB2-203ENST00000446922 FRMPD4Q14CM0 1322 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 PIK3CDO00329 1044 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 RGS20O76081 388 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 PARNO95453 639 aaKnown RBP17.98■□□□□ 0.47
HMGB2-203ENST00000446922 ACRP10323 421 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 MYCLP12524 364 aaPredicted RBP17.98■□□□□ 0.47
HMGB2-203ENST00000446922 CCL23P55773 120 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 GNPTABQ3T906 1256 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 FAM47CQ5HY64 1035 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 CCDC155Q8N6L0 562 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 RETREG2Q8NC44 543 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
HMGB2-203ENST00000446922 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
HMGB2-203ENST00000446922 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
HMGB2-203ENST00000446922 RAB30Q15771 203 aa17.97■□□□□ 0.47
HMGB2-203ENST00000446922 CELF3Q5SZQ8 465 aaKnown RBP17.97■□□□□ 0.47
HMGB2-203ENST00000446922 CAGE1Q8TC20 777 aa17.97■□□□□ 0.47
HMGB2-203ENST00000446922 CUL5Q93034 780 aa17.97■□□□□ 0.47
HMGB2-203ENST00000446922 FAM161BQ96MY7 647 aa17.97■□□□□ 0.47
HMGB2-203ENST00000446922 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
HMGB2-203ENST00000446922 HAS3O00219 553 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 CYP2C9P11712 490 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 ICAM3P32942 547 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 KRT32Q14532 448 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 FANCBQ8NB91 859 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 KAT2BQ92831 832 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 TIFAQ96CG3 184 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 NOD1Q9Y239 953 aa17.96■□□□□ 0.47
HMGB2-203ENST00000446922 CDC45O75419 566 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 F2P00734 622 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
HMGB2-203ENST00000446922 ACTN1P12814 892 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 RBL2Q08999 1139 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 PTGISQ16647 500 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
HMGB2-203ENST00000446922 AFAP1L1Q8TED9 768 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
HMGB2-203ENST00000446922 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 ZNF576Q9H609 170 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 GTF2IRD1Q9UHL9 959 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 MSRAQ9UJ68 235 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 SLC4A7Q9Y6M7 1214 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
HMGB2-203ENST00000446922 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
HMGB2-203ENST00000446922 PSEN2P49810 448 aa17.94■□□□□ 0.46
HMGB2-203ENST00000446922 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
HMGB2-203ENST00000446922 NEDD9Q14511 834 aa17.94■□□□□ 0.46
HMGB2-203ENST00000446922 PCNX4Q63HM2 1172 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms