RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MAP4K1Q92918 833 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 RIOX1Q9H6W3 641 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 DDX41Q9UJV9 622 aaKnown RBP24.41■■□□□ 1.5
VSX1-206ENST00000444511 SCN10AQ9Y5Y9 1956 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 CDH23Q9H251 3354 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 A0A0C4DFX4 3053 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 PITPNM1O00562 1244 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 HOXA13P31271 388 aaPredicted RBP24.4■■□□□ 1.5
VSX1-206ENST00000444511 TROAPQ12815 778 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 DGKDQ16760 1214 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 SLC35G1Q2M3R5 365 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 GAS2L1Q99501 681 aaPredicted RBP24.4■■□□□ 1.5
VSX1-206ENST00000444511 PDCD2LQ9BRP1 358 aa24.4■■□□□ 1.5
VSX1-206ENST00000444511 RBM8AQ9Y5S9 174 aaKnown RBP24.4■■□□□ 1.5
VSX1-206ENST00000444511 MYH6P13533 1939 aa24.39■■□□□ 1.5
VSX1-206ENST00000444511 GCOM1H8Y6P7 765 aaPredicted RBP24.39■■□□□ 1.49
VSX1-206ENST00000444511 POLR2MP0CAP2 368 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 RFC2P35250 354 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 BFSP2Q13515 415 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 LAMC2Q13753 1193 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 PTGISQ16647 500 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 DHX37Q8IY37 1157 aaKnown RBP24.39■■□□□ 1.49
VSX1-206ENST00000444511 EMID1Q96A84 441 aaPredicted RBP24.39■■□□□ 1.49
VSX1-206ENST00000444511 VWCEQ96DN2 955 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 NKX2-4Q9H2Z4 354 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 SLC28A3Q9HAS3 691 aa24.39■■□□□ 1.49
VSX1-206ENST00000444511 PNMA6FA0A0J9YX94 578 aa24.38■■□□□ 1.49
VSX1-206ENST00000444511 ACTN1P12814 892 aa24.38■■□□□ 1.49
VSX1-206ENST00000444511 ANTXR2P58335 489 aa24.38■■□□□ 1.49
VSX1-206ENST00000444511 MB21D2Q8IYB1 491 aaPredicted RBP24.38■■□□□ 1.49
VSX1-206ENST00000444511 CCDC155Q8N6L0 562 aa24.38■■□□□ 1.49
VSX1-206ENST00000444511 COL25A1Q9BXS0 654 aaPredicted RBP24.38■■□□□ 1.49
VSX1-206ENST00000444511 PRDM12Q9H4Q4 367 aa24.38■■□□□ 1.49
VSX1-206ENST00000444511 UNC80Q8N2C7 3258 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 CYTH3O43739 400 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 IQCF3P0C7M6 154 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 ATP2A2P16615 1042 aaKnown RBP24.37■■□□□ 1.49
VSX1-206ENST00000444511 PGM5Q15124 567 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 KCNV1Q6PIU1 500 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 FCHSD1Q86WN1 690 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 PPTC7Q8NI37 304 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 IGDCC4Q8TDY8 1250 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 KAT2BQ92831 832 aa24.37■■□□□ 1.49
VSX1-206ENST00000444511 YBX2Q9Y2T7 364 aaKnown RBP24.37■■□□□ 1.49
VSX1-206ENST00000444511 CCND2P30279 289 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 RABGGTBP53611 331 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 GDF6Q6KF10 455 aaPredicted RBP24.36■■□□□ 1.49
VSX1-206ENST00000444511 VSIG10LQ86VR7 867 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 SESTD1Q86VW0 696 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 PIBF1Q8WXW3 757 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 KATNAL1Q9BW62 490 aa24.36■■□□□ 1.49
VSX1-206ENST00000444511 FTOQ9C0B1 505 aaKnown RBP eCLIP24.36■■□□□ 1.49
VSX1-206ENST00000444511 RGS20O76081 388 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 CASC1Q6TDU7 716 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 C7orf31Q8N865 590 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 IL31RAQ8NI17 732 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 CTCFLQ8NI51 663 aaPredicted RBP24.35■■□□□ 1.49
VSX1-206ENST00000444511 CAGE1Q8TC20 777 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 ALG1Q9BT22 464 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 PCDHA11Q9Y5I1 949 aa24.35■■□□□ 1.49
VSX1-206ENST00000444511 KIAA1217Q5T5P2 1943 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 ZNF286BP0CG31 522 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 PSEN2P49810 448 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 ZNF654Q8IZM8 581 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 AFAP1L1Q8TED9 768 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 LY9Q9HBG7 655 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 GTF2IRD1Q9UHL9 959 aa24.34■■□□□ 1.49
VSX1-206ENST00000444511 EYSQ5T1H1 3165 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 PRC1O43663 620 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 SORBS3O60504 671 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 DDAH1O94760 285 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 GGPS1O95749 300 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 KIF5BP33176 963 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 MFSD10Q14728 455 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 CELF3Q5SZQ8 465 aaKnown RBP24.33■■□□□ 1.49
VSX1-206ENST00000444511 MYSM1Q5VVJ2 828 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 PPP2R2DQ66LE6 453 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 ZFP91Q96JP5 570 aaPredicted RBP24.33■■□□□ 1.49
VSX1-206ENST00000444511 SPATA33Q96N06 139 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 MAP3K14Q99558 947 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 MYL10Q9BUA6 226 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 HDAC6Q9UBN7 1215 aa24.33■■□□□ 1.49
VSX1-206ENST00000444511 PPFIA4O75335 1185 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 F2P00734 622 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 TGFB3P10600 412 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 MYOGP15173 224 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 KIAA0753Q2KHM9 967 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 NFXL1Q6ZNB6 911 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 USP38Q8NB14 1042 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 RRP36Q96EU6 259 aaKnown RBP24.32■■□□□ 1.48
VSX1-206ENST00000444511 CTAGE1Q96RT6 745 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 MTA3Q9BTC8 594 aa24.32■■□□□ 1.48
VSX1-206ENST00000444511 LSG1Q9H089 658 aaKnown RBP24.32■■□□□ 1.48
VSX1-206ENST00000444511 SELPP16109 830 aa24.31■■□□□ 1.48
VSX1-206ENST00000444511 UBA1P22314 1058 aaKnown RBP24.31■■□□□ 1.48
VSX1-206ENST00000444511 IGFBP4P22692 258 aa24.31■■□□□ 1.48
VSX1-206ENST00000444511 MCM5P33992 734 aa24.31■■□□□ 1.48
VSX1-206ENST00000444511 HSDL1Q3SXM5 330 aa24.31■■□□□ 1.48
VSX1-206ENST00000444511 TMTC2Q8N394 836 aa24.31■■□□□ 1.48
VSX1-206ENST00000444511 PPM1EQ8WY54 764 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms