RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
HSPG2-206ENST00000439717 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 C6orf50Q9HD87 102 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 STK36Q9NRP7 1315 aa13.56□□□□□ -0.24
HSPG2-206ENST00000439717 ST18O60284 1047 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-206ENST00000439717 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
HSPG2-206ENST00000439717 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
HSPG2-206ENST00000439717 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 TLK2Q86UE8 772 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
HSPG2-206ENST00000439717 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 ZSCAN31Q96LW9 406 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-206ENST00000439717 PCDHA6Q9UN73 950 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 PHF24Q9UPV7 400 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 PCDHA8Q9Y5H6 950 aa13.55□□□□□ -0.24
HSPG2-206ENST00000439717 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-206ENST00000439717 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 LARGE1O95461 756 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 C6orf222P0C671 652 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-206ENST00000439717 TGFB3P10600 412 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 CCSAPQ6IQ19 270 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-206ENST00000439717 CCDC62Q6P9F0 684 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 IL31RAQ8NI17 732 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 WASF1Q92558 559 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-206ENST00000439717 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-206ENST00000439717 VPS54Q9P1Q0 977 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
HSPG2-206ENST00000439717 CTAGE5O15320 804 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 ZEB2O60315 1214 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 ARIH2O95376 493 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 XBP1P17861 261 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 ICAM3P32942 547 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
HSPG2-206ENST00000439717 KCNA10Q16322 511 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 FSCN1Q16658 493 aaKnown RBP13.53□□□□□ -0.24
HSPG2-206ENST00000439717 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 TMEM63BQ5T3F8 832 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
HSPG2-206ENST00000439717 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-206ENST00000439717 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
HSPG2-206ENST00000439717 MKI67P46013 3256 aaKnown RBP13.52□□□□□ -0.24
HSPG2-206ENST00000439717 MYADML2A6NDP7 307 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 FIBPO43427 364 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 RGS20O76081 388 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 GH1P01241 217 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 MCM2P49736 904 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 CPT1AP50416 773 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 ACLYP53396 1101 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 NLRP5P59047 1200 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 LY6KQ17RY6 165 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 BRDTQ58F21 947 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 NLRX1Q86UT6 975 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
HSPG2-206ENST00000439717 ORC3Q9UBD5 711 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-206ENST00000439717 KIAA1217Q5T5P2 1943 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 A0A1W2PQ45 241 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-206ENST00000439717 A0A1W2PQY0 241 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 SPATA31C2B4DYI2 1134 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 MAFGO15525 162 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 CABYRO75952 493 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 ASGR1P07306 291 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 SREBF1P36956 1147 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 LAMC2Q13753 1193 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 SNX17Q15036 470 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 C1orf53Q5VUE5 145 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 SLC39A5Q6ZMH5 540 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 DPF3Q92784 378 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 COPS5Q92905 334 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 GLT1D1Q96MS3 346 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 POLR3EQ9NVU0 708 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 TMEM260Q9NX78 707 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 RTEL1Q9NZ71 1219 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
HSPG2-206ENST00000439717 ELP1O95163 1332 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 A6NJR5 290 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 EVI5O60447 810 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 KPNA6O60684 536 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 FDPSP14324 419 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms