RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 CHTF18Q8WVB6 975 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 HAUS7Q99871 368 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 AP1M1Q9BXS5 423 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 VPS11Q9H270 941 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 RTEL1Q9NZ71 1219 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 PCDHA9Q9Y5H5 950 aa6.3□□□□□ -1.4
HMGB3P10-201ENST00000434734 WDR64B1ANS9 1081 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 PDE2AO00408 941 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 INMTO95050 263 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TBC1D8O95759 1140 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 CFBP00751 764 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 MAPTP10636 758 aaKnown RBP6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 VCAM1P19320 739 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 PPM1AP35813 382 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TSPAN7P41732 249 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 PRIM2P49643 509 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 KRT85P78386 507 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 CTBSQ01459 385 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TNFAIP2Q03169 654 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 HYAL2Q12891 473 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 GRM1Q13255 1194 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 SEMA5AQ13591 1074 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 INPP5AQ14642 412 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 SEPT2Q15019 361 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 KIAA0753Q2KHM9 967 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 ZNF423Q2M1K9 1284 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TTLL5Q6EMB2 1281 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 CYP26C1Q6V0L0 522 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 GALNT5Q7Z7M9 940 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TMEM192Q8IY95 271 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 OR2C3Q8N628 320 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 BTN2A2Q8WVV5 523 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 PTPRN2Q92932 1015 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 TBC1D20Q96BZ9 403 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 ZBTB10Q96DT7 871 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 UBXN10Q96LJ8 280 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 NSUN5Q96P11 429 aaKnown RBP6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 KLHL25Q9H0H3 589 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 LRCH1Q9Y2L9 728 aa6.29□□□□□ -1.4
HMGB3P10-201ENST00000434734 C2CD2LO14523 706 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 EFSO43281 561 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 CNOT4O95628 575 aaKnown RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 B3GALT4O96024 378 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 HRGP04196 525 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 FAM200BP0CF97 657 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 NAT2P11245 290 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 SCP2P22307 547 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 OAS2P29728 719 aaKnown RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 CLK1P49759 484 aaKnown RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 PMS1P54277 932 aaKnown RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 PCDH1Q08174 1060 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 PPFIA1Q13136 1202 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 PRKG2Q13237 762 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MLECQ14165 292 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MAP1SQ66K74 1059 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 LMBRD2Q68DH5 695 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MSL1Q68DK7 614 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 FAAH2Q6GMR7 532 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 LILRA6Q6PI73 481 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 KIF18BQ86Y91 864 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 GALNT6Q8NCL4 622 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 DIS3LQ8TF46 1054 aaKnown RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 TRIM63Q969Q1 353 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 HVCN1Q96D96 273 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 PLPPR2Q96GM1 343 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MRGPRX3Q96LB0 322 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 FAM193BQ96PV7 902 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 SLC26A6Q9BXS9 759 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 SEZ6LQ9BYH1 1024 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 FAM204AQ9H8W3 233 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 ARFGAP3Q9NP61 516 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 TBC1D22BQ9NU19 505 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MARK1Q9P0L2 795 aa6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 H2AFY2Q9P0M6 372 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 MAGED1Q9Y5V3 778 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P10-201ENST00000434734 B4E1Z4 1266 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 H3BRJ5 948 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 PIK3R2O00459 728 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 TRAF5O00463 557 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 TOR1BO14657 336 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 NCK2O43639 380 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ULK1O75385 1050 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 SCAND1P57086 179 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATP11AP98196 1134 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ACAP2Q15057 778 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 CLUL1Q15846 466 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 NUP133Q8WUM0 1156 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms