RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 SEPT11Q9NVA2 429 aaKnown RBP11.57□□□□□ -0.56
SCAF4-203ENST00000434667 PLAAQ9Y263 795 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 CCNT1O60563 726 aaKnown RBP11.57□□□□□ -0.56
SCAF4-203ENST00000434667 COPB2P35606 906 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 CCDC91Q7Z6B0 441 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 AMOTL1Q8IY63 956 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 GIMAP8Q8ND71 665 aaPredicted RBP11.57□□□□□ -0.56
SCAF4-203ENST00000434667 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
SCAF4-203ENST00000434667 HAUS2Q9NVX0 235 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 RMND1Q9NWS8 449 aa11.57□□□□□ -0.56
SCAF4-203ENST00000434667 MEFVO15553 781 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 ATF3P18847 181 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 MCM3P25205 808 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TXKP42681 527 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 PAFAH1B1P43034 410 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 SPTY2D1Q68D10 685 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 MMGT1Q8N4V1 131 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 CCDC114Q96M63 670 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 FGFBP2Q9BYJ0 223 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 NEUROG2Q9H2A3 272 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 GOLGA8KD6RF30 607 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 RAD51CO43502 376 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 USO1O60763 962 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TUBBP07437 444 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 KLRC1P26715 233 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 EPS15P42566 896 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 EPHB4P54760 987 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 EVA1CP58658 441 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 CABP7Q86V35 215 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 ZKSCAN4Q969J2 545 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 RIOK1Q9BRS2 568 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TMEM260Q9NX78 707 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 STX8Q9UNK0 236 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 PHF20L1A8MW92 1017 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TMCO5BA8MYB1 307 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 OPA1O60313 960 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 PRDX5P30044 214 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 NLRP14Q86W24 1093 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
SCAF4-203ENST00000434667 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
SCAF4-203ENST00000434667 A0A1W2PQC6 194 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-203ENST00000434667 MYCBPAPQ8TBZ2 947 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 TBC1D31Q96DN5 1066 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 TRIM9Q9C026 710 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 NDST4Q9H3R1 872 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 ADAMTS1Q9UHI8 967 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PCDHA6Q9UN73 950 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PCDHA8Q9Y5H6 950 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 DNM1LO00429 736 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 CYTH3O43739 400 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 STARD3NLO95772 234 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 NF2P35240 595 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 TUBB4BP68371 445 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
SCAF4-203ENST00000434667 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 THAP9Q9H5L6 903 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 CNOT8Q9UFF9 292 aaKnown RBP11.55□□□□□ -0.56
SCAF4-203ENST00000434667 SUFUQ9UMX1 484 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 ERVV-2B6SEH9 535 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 IL2RBP14784 551 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PTGISQ16647 500 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 PFKFB3Q16875 520 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-203ENST00000434667 CNPY4Q8N129 248 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 EHBP1Q8NDI1 1231 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-203ENST00000434667 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 BCL9O00512 1426 aa11.55□□□□□ -0.56
SCAF4-203ENST00000434667 POTEMA6NI47 508 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 CCNE1P24864 410 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 TFAP4Q01664 338 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 LLGL1Q15334 1064 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 UBAP2Q5T6F2 1119 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 CELF4Q9BZC1 486 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 TLR2O60603 784 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 PPP1R37O75864 691 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 NEBLO76041 1014 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 ACTN1P12814 892 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 PNMA8AQ86V59 439 aaPredicted RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 IQCKQ8N0W5 287 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 MCM9Q9NXL9 1143 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms