RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 SMPD1P17405 629 aa28.77■■■□□ 2.2
CPNE1-212ENST00000430570 AP3B2Q13367 1082 aa28.77■■■□□ 2.2
CPNE1-212ENST00000430570 IQSEC1Q6DN90 963 aa28.77■■■□□ 2.2
CPNE1-212ENST00000430570 REXO1Q8N1G1 1221 aaKnown RBP28.77■■■□□ 2.2
CPNE1-212ENST00000430570 RTEL1Q9NZ71 1219 aa28.77■■■□□ 2.2
CPNE1-212ENST00000430570 OGDHLQ9ULD0 1010 aa28.77■■■□□ 2.2
CPNE1-212ENST00000430570 BRCA2P51587 3418 aa28.76■■■□□ 2.2
CPNE1-212ENST00000430570 XBP1P17861 261 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 TNFAIP2Q03169 654 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 PCNX4Q63HM2 1172 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 BLIDQ8IZY5 108 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 FAM177A1Q8N128 213 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-212ENST00000430570 DAGLBQ8NCG7 672 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 BICD2Q8TD16 824 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 WDR11Q9BZH6 1224 aa28.76■■■□□ 2.19
CPNE1-212ENST00000430570 FRMPD3Q5JV73 1810 aa28.75■■■□□ 2.19
CPNE1-212ENST00000430570 M0R2N6 131 aa28.75■■■□□ 2.19
CPNE1-212ENST00000430570 ARIH2O95376 493 aa28.75■■■□□ 2.19
CPNE1-212ENST00000430570 HMGN5P82970 282 aaKnown RBP28.75■■■□□ 2.19
CPNE1-212ENST00000430570 GJC2Q5T442 439 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-212ENST00000430570 SNX21Q969T3 373 aa28.75■■■□□ 2.19
CPNE1-212ENST00000430570 RARBP10826 455 aa28.74■■■□□ 2.19
CPNE1-212ENST00000430570 IRX5P78411 483 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-212ENST00000430570 CUL4AQ13619 759 aa28.74■■■□□ 2.19
CPNE1-212ENST00000430570 GALNT17Q6IS24 598 aa28.74■■■□□ 2.19
CPNE1-212ENST00000430570 GNEQ9Y223 722 aaKnown RBP28.74■■■□□ 2.19
CPNE1-212ENST00000430570 KIAA1217Q5T5P2 1943 aa28.74■■■□□ 2.19
CPNE1-212ENST00000430570 DUSP11O75319 330 aaKnown RBP28.73■■■□□ 2.19
CPNE1-212ENST00000430570 KRT40Q6A162 431 aa28.73■■■□□ 2.19
CPNE1-212ENST00000430570 CCDC62Q6P9F0 684 aa28.73■■■□□ 2.19
CPNE1-212ENST00000430570 OXER1Q8TDS5 423 aa28.73■■■□□ 2.19
CPNE1-212ENST00000430570 SCFD2Q8WU76 684 aa28.73■■■□□ 2.19
CPNE1-212ENST00000430570 EHMT1Q9H9B1 1298 aa28.73■■■□□ 2.19
CPNE1-212ENST00000430570 K7ELQ4 463 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-212ENST00000430570 PGK1P00558 417 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 SREBF1P36956 1147 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 MNX1P50219 401 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-212ENST00000430570 GUCY1B3Q02153 619 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 XRRA1Q6P2D8 792 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 FAM184AQ8NB25 1140 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 COPS5Q92905 334 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 XPNPEP3Q9NQH7 507 aa28.72■■■□□ 2.19
CPNE1-212ENST00000430570 TXNP10599 105 aaKnown RBP28.71■■■□□ 2.19
CPNE1-212ENST00000430570 TTLL4Q14679 1199 aa28.71■■■□□ 2.19
CPNE1-212ENST00000430570 LY6KQ17RY6 165 aa28.71■■■□□ 2.19
CPNE1-212ENST00000430570 DUSP28Q4G0W2 176 aa28.71■■■□□ 2.19
CPNE1-212ENST00000430570 MCTP2Q6DN12 878 aa28.71■■■□□ 2.19
CPNE1-212ENST00000430570 CRYGNQ8WXF5 182 aa28.71■■■□□ 2.19
CPNE1-212ENST00000430570 INPP4AQ96PE3 977 aaPredicted RBP28.71■■■□□ 2.19
CPNE1-212ENST00000430570 SYNRGQ9UMZ2 1314 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 EDIL3O43854 480 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 ADAMTS4O75173 837 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 ARHGAP4P98171 946 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 SEMA3FQ13275 785 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 DDX41Q9UJV9 622 aaKnown RBP28.7■■■□□ 2.19
CPNE1-212ENST00000430570 UBIAD1Q9Y5Z9 338 aa28.7■■■□□ 2.19
CPNE1-212ENST00000430570 MYADML2A6NDP7 307 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 DYNC1LI2O43237 492 aaPredicted RBP28.69■■■□□ 2.18
CPNE1-212ENST00000430570 STAM2O75886 525 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 MMP1P03956 469 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 MYCNP04198 464 aaPredicted RBP28.69■■■□□ 2.18
CPNE1-212ENST00000430570 ITGB5P18084 799 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 GJB2P29033 226 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 CYP2W1Q8TAV3 490 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 C8orf76Q96K31 380 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 MRVI1Q9Y6F6 885 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 CTAGE5O15320 804 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 GJA9P57773 515 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 SP2Q02086 613 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 TRIM29Q14134 588 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 LRRC41Q15345 812 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 DIS3LQ8TF46 1054 aaKnown RBP28.69■■■□□ 2.18
CPNE1-212ENST00000430570 UPF3AQ9H1J1 476 aaKnown RBP28.69■■■□□ 2.18
CPNE1-212ENST00000430570 SMC3Q9UQE7 1217 aa28.69■■■□□ 2.18
CPNE1-212ENST00000430570 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.69■■■□□ 2.18
CPNE1-212ENST00000430570 MYH7BA7E2Y1 1941 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 CYP3A4P08684 503 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 ICAM3P32942 547 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 KRT2P35908 639 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 NR5A1Q13285 461 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 EARS2Q5JPH6 523 aaKnown RBP28.68■■■□□ 2.18
CPNE1-212ENST00000430570 TLK2Q86UE8 772 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 KLHDC9Q8NEP7 349 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 Q9Y3F1 56 aa28.68■■■□□ 2.18
CPNE1-212ENST00000430570 BTBD18B2RXH4 712 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 SPATA31C2B4DYI2 1134 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 GNPTABQ3T906 1256 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 NLRX1Q86UT6 975 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 ARRDC4Q8NCT1 418 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 FBXO18Q8NFZ0 1043 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 TBCKQ8TEA7 893 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 TNFRSF25Q93038 417 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 MXRA8Q9BRK3 442 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 BCAS3Q9H6U6 928 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 JADE2Q9NQC1 790 aa28.67■■■□□ 2.18
CPNE1-212ENST00000430570 NKRFO15226 690 aaKnown RBP eCLIP28.66■■■□□ 2.18
CPNE1-212ENST00000430570 C6orf222P0C671 652 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-212ENST00000430570 CAPN2P17655 700 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 BEX3Q00994 111 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 UBE2Q1Q7Z7E8 422 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms