RNA–Protein interactions for RNA: ENST00000429254.1

LNCPRESS1-201, Transcript of lncRNA p53 regulated and ESC associated 1, humanhuman

TSL 1 (best) BASIC

Gene LNCPRESS1, Length 756 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNCPRESS1-201ENST00000429254 NKX3-2P78367 333 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 TTLL4Q14679 1199 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 FSCN1Q16658 493 aaKnown RBP17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 UBE2SQ16763 222 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 TRIM60Q495X7 471 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 TYW1BQ6NUM6 668 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 OR6J1Q8NGC5 347 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PHKBQ93100 1093 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PSTPIP2Q9H939 334 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 STARD7Q9NQZ5 370 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 Q9Y3F1 56 aa17.8■□□□□ 0.44
LNCPRESS1-201ENST00000429254 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 STXBP3O00186 592 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 EIF3JO75822 258 aaKnown RBP17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 CCND2P30279 289 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 STK3Q13188 491 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 SNX17Q15036 470 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 LY6KQ17RY6 165 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 GLT1D1Q96MS3 346 aa17.79■□□□□ 0.44
LNCPRESS1-201ENST00000429254 NKRFO15226 690 aaKnown RBP eCLIP17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 NTRK3Q16288 839 aa17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 VSIG10LQ86VR7 867 aa17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 ZNF274Q96GC6 653 aaPredicted RBP17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 MRVI1Q9Y6F6 885 aa17.78■□□□□ 0.44
LNCPRESS1-201ENST00000429254 hCG_1984214I3L0E3 225 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 RGS20O76081 388 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 SCG2P13521 617 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PFKFB3Q16875 520 aaPredicted RBP17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PPP1R18Q6NYC8 613 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 ZNF713Q8N859 430 aaPredicted RBP17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 VTI1AQ96AJ9 217 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 IL17RAQ96F46 866 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
LNCPRESS1-201ENST00000429254 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ZEB2O60315 1214 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 IFNAR1P17181 557 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 CPT1AP50416 773 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ADCY7P51828 1080 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 AK2P54819 239 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 MRPS9P82933 396 aaKnown RBP17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PKN1Q16512 942 aa17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 DDX41Q9UJV9 622 aaKnown RBP17.76■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ELP1O95163 1332 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SMCO2A6NFE2 343 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 GH1P01241 217 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 MYL3P08590 195 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 TLE2Q04725 743 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ARHGAP1Q07960 439 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PGBD1Q96JS3 809 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PRDM5Q9NQX1 630 aaPredicted RBP17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 RTEL1Q9NZ71 1219 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
LNCPRESS1-201ENST00000429254 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 CPLX1O14810 134 aa17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SORBS3O60504 671 aa17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SCRN1Q12765 414 aa17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PCNX4Q63HM2 1172 aa17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ALDH8A1Q9H2A2 487 aaPredicted RBP17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 COLQQ9Y215 455 aaPredicted RBP17.74■□□□□ 0.43
LNCPRESS1-201ENST00000429254 A6NJR5 290 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 CABYRO75952 493 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 NEK4P51957 841 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PSMC6P62333 389 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PURAQ00577 322 aaKnown RBP17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 BRDTQ58F21 947 aaPredicted RBP17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SH3RF1Q7Z6J0 888 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 INPP4AQ96PE3 977 aaPredicted RBP17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ARVCFO00192 962 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 STAM2O75886 525 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 GGPS1O95749 300 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 MMP3P08254 477 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 CLTBP09497 229 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 UBA1P22314 1058 aaKnown RBP17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SP2Q02086 613 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 SEMA3FQ13275 785 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 ITGA7Q13683 1181 aa17.72■□□□□ 0.43
LNCPRESS1-201ENST00000429254 GNPTABQ3T906 1256 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms