RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 RCBTB1Q8NDN9 531 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 C1GALT1Q9NS00 363 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 ZNF652Q9Y2D9 606 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 LTFP02788 710 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 LCP1P13796 627 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PAMP19021 973 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 DNM2P50570 870 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PHC1P78364 1004 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 LACTBP83111 547 aaPredicted RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PCBP2Q15366 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PJA1Q8NG27 643 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 LGR6Q9HBX8 967 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 BSDC1Q9NW68 430 aaPredicted RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 GTF2IRD1Q9UHL9 959 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CNTNAP4Q9C0A0 1308 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 SHISA3A0PJX4 238 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 IGF2BP3O00425 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 ZNF205O95201 554 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 NBPF7P0C2Y1 421 aaPredicted RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 SRFP11831 508 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 GLB1P16278 677 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 LPOP22079 712 aaPredicted RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 GRK2P25098 689 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 GRK3P35626 688 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 PICALMQ13492 652 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 SGO2Q562F6 1265 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 GPR158Q5T848 1215 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 EPM2AIP1Q7L775 607 aaPredicted RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 TTC17Q96AE7 1141 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 LENG1Q96BZ8 264 aaPredicted RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 HSPBAP1Q96EW2 488 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 TCTN2Q96GX1 697 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 BOCQ9BWV1 1114 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 MKS1Q9NXB0 559 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 NPHP3-ACAD11A0A0J9YXS1 232 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 MYO1BO43795 1136 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 CBX7O95931 251 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 IFIT2P09913 472 aaKnown RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 ENDOUP21128 410 aaKnown RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 TPP2P29144 1249 aaPredicted RBP5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 GTF2A2P52657 109 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 CRY1Q16526 586 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 BROXQ5VW32 411 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 RASSF3Q86WH2 238 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 NEDD1Q8NHV4 660 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 MYRFLQ96LU7 910 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 USP25Q9UHP3 1055 aa5.86□□□□□ -1.47
NUDCD1-202ENST00000427660 FAM95CA0A1B0GW59 222 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 H7C1D1 291 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 TGM5O43548 720 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 ALX3O95076 343 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 MAP4P27816 1152 aaKnown RBP5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 TERF2Q15554 542 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 ZRSR2Q15696 482 aaKnown RBP5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 LINC00116Q8NCU8 138 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 ZNF775Q96BV0 537 aaPredicted RBP5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 PRDM16Q9HAZ2 1276 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 NOP53Q9NZM5 478 aaKnown RBP5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 ZBTB21Q9ULJ3 1066 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 PCDHA2Q9Y5H9 948 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 SPO11Q9Y5K1 396 aa5.85□□□□□ -1.47
NUDCD1-202ENST00000427660 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 LSP1P33241 339 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 NRG1Q02297 640 aaPredicted RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 TNK2Q07912 1038 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 LRRC32Q14392 662 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 HSP90AB4PQ58FF6 505 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 RTP2Q5QGT7 225 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 PAOXQ6QHF9 649 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 SHISA2Q6UWI4 295 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 APBB1IPQ7Z5R6 666 aaPredicted RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 AMOTL1Q8IY63 956 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 CISD2Q8N5K1 135 aaKnown RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 UBL7Q96S82 380 aaPredicted RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 TRIT1Q9H3H1 467 aaKnown RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 H2AFY2Q9P0M6 372 aaPredicted RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 LEFTY1O75610 366 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 BMP3P12645 472 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 RXRBP28702 533 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 HTR3AP46098 478 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 LSAMPQ13449 338 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 TMED8Q6PL24 325 aaPredicted RBP5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 C11orf96Q7Z7L8 435 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 TIFAQ96CG3 184 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 MAN1C1Q9NR34 630 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 CATSPERZQ9NTU4 200 aa5.84□□□□□ -1.47
NUDCD1-202ENST00000427660 MKL2Q9ULH7 1088 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms