RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 VSIG10LQ86VR7 867 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 VWCEQ96DN2 955 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 ZFP91Q96JP5 570 aaPredicted RBP21.39■■□□□ 1.01
NUP50-207ENST00000424634 TMEM87BQ96K49 555 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 LRRC2Q9BYS8 371 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 TTYH1Q9H313 450 aaPredicted RBP21.39■■□□□ 1.01
NUP50-207ENST00000424634 IL23AQ9NPF7 189 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 A0A0C4DFX4 3053 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 MMP3P08254 477 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 RXRAP19793 462 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 TRAF1Q13077 416 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 PGM5Q15124 567 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 FCHSD1Q86WN1 690 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 SRBD1Q8N5C6 995 aaKnown RBP21.38■■□□□ 1.01
NUP50-207ENST00000424634 SPZ1Q9BXG8 430 aa21.38■■□□□ 1.01
NUP50-207ENST00000424634 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.37■■□□□ 1.01
NUP50-207ENST00000424634 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.37■■□□□ 1.01
NUP50-207ENST00000424634 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 SMARCA1P28370 1054 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 LIFRP42702 1097 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 NFRKBQ6P4R8 1299 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 NFXL1Q6ZNB6 911 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 RAB11FIP4Q86YS3 637 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 CMTR1Q8N1G2 835 aaKnown RBP21.37■■□□□ 1.01
NUP50-207ENST00000424634 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
NUP50-207ENST00000424634 KAT2BQ92831 832 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 MRVI1Q9Y6F6 885 aa21.37■■□□□ 1.01
NUP50-207ENST00000424634 EYSQ5T1H1 3165 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 CCDC69A6NI79 296 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 SUPT20HL2P0C7V6 817 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 KIF5BP33176 963 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 SP2Q02086 613 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 FAM47CQ5HY64 1035 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 EMID1Q96A84 441 aaPredicted RBP21.36■■□□□ 1.01
NUP50-207ENST00000424634 SCLYQ96I15 445 aa21.36■■□□□ 1.01
NUP50-207ENST00000424634 SCN5AQ14524 2016 aa21.35■■□□□ 1.01
NUP50-207ENST00000424634 GRXCR1A8MXD5 290 aa21.35■■□□□ 1.01
NUP50-207ENST00000424634 PSRC1Q6PGN9 363 aaPredicted RBP21.35■■□□□ 1.01
NUP50-207ENST00000424634 RASEFQ8IZ41 740 aa21.35■■□□□ 1.01
NUP50-207ENST00000424634 HERVK_113Q902F9 699 aa21.35■■□□□ 1.01
NUP50-207ENST00000424634 GPKOWQ92917 476 aaPredicted RBP eCLIP21.35■■□□□ 1.01
NUP50-207ENST00000424634 RRP36Q96EU6 259 aaKnown RBP21.35■■□□□ 1.01
NUP50-207ENST00000424634 CDX2Q99626 313 aaPredicted RBP21.35■■□□□ 1.01
NUP50-207ENST00000424634 LZTS2Q9BRK4 669 aa21.35■■□□□ 1.01
NUP50-207ENST00000424634 CXXC1Q9P0U4 656 aaPredicted RBP21.35■■□□□ 1.01
NUP50-207ENST00000424634 TRIP12Q14669 1992 aaPredicted RBP21.34■■□□□ 1.01
NUP50-207ENST00000424634 FGBP02675 491 aa21.34■■□□□ 1.01
NUP50-207ENST00000424634 CHMP4BP1P59074 171 aa21.34■■□□□ 1.01
NUP50-207ENST00000424634 PTPN11Q06124 597 aaPredicted RBP21.34■■□□□ 1.01
NUP50-207ENST00000424634 LAMC2Q13753 1193 aa21.34■■□□□ 1.01
NUP50-207ENST00000424634 MYSM1Q5VVJ2 828 aa21.34■■□□□ 1.01
NUP50-207ENST00000424634 DHX37Q8IY37 1157 aaKnown RBP21.34■■□□□ 1.01
NUP50-207ENST00000424634 CHD9Q3L8U1 2897 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 SORBS3O60504 671 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 CDC45O75419 566 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 CASTP20810 708 aaKnown RBP21.33■■□□□ 1.01
NUP50-207ENST00000424634 CCND2P30279 289 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 GNAQP50148 359 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 MRPS9P82933 396 aaKnown RBP21.33■■□□□ 1.01
NUP50-207ENST00000424634 EXOSC10Q01780 885 aaKnown RBP21.33■■□□□ 1.01
NUP50-207ENST00000424634 DGKDQ16760 1214 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 ADCK5Q3MIX3 580 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 USP17L6PQ6QN14 398 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 SGMS1Q86VZ5 419 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 FANCBQ8NB91 859 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 SLC17A8Q8NDX2 589 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 NEK1Q96PY6 1258 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 CTAGE1Q96RT6 745 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 BCAS3Q9H6U6 928 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 SLC12A7Q9Y666 1083 aa21.33■■□□□ 1.01
NUP50-207ENST00000424634 FRMPD4Q14CM0 1322 aa21.32■■□□□ 1
NUP50-207ENST00000424634 UNC80Q8N2C7 3258 aa21.32■■□□□ 1
NUP50-207ENST00000424634 hCG_1642624A0A1W2PR95 340 aa21.32■■□□□ 1
NUP50-207ENST00000424634 MEIS2O14770 477 aa21.32■■□□□ 1
NUP50-207ENST00000424634 CALM1P0DP23 149 aa21.32■■□□□ 1
NUP50-207ENST00000424634 CALM2P0DP24 149 aa21.32■■□□□ 1
NUP50-207ENST00000424634 CALM3P0DP25 149 aa21.32■■□□□ 1
NUP50-207ENST00000424634 DNAJB2P25686 324 aa21.32■■□□□ 1
NUP50-207ENST00000424634 PBX2P40425 430 aa21.32■■□□□ 1
NUP50-207ENST00000424634 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
NUP50-207ENST00000424634 CELF3Q5SZQ8 465 aaKnown RBP21.32■■□□□ 1
NUP50-207ENST00000424634 RNF20Q5VTR2 975 aa21.32■■□□□ 1
NUP50-207ENST00000424634 GDF6Q6KF10 455 aaPredicted RBP21.32■■□□□ 1
NUP50-207ENST00000424634 KCNV1Q6PIU1 500 aa21.32■■□□□ 1
NUP50-207ENST00000424634 OTOP2Q7RTS6 562 aa21.32■■□□□ 1
NUP50-207ENST00000424634 PPTC7Q8NI37 304 aa21.32■■□□□ 1
NUP50-207ENST00000424634 CCDC136Q96JN2 1154 aa21.32■■□□□ 1
NUP50-207ENST00000424634 TCEANC2Q96MN5 208 aa21.32■■□□□ 1
NUP50-207ENST00000424634 GGPS1O95749 300 aa21.31■■□□□ 1
NUP50-207ENST00000424634 TGFB3P10600 412 aa21.31■■□□□ 1
NUP50-207ENST00000424634 HOXD8P13378 290 aaPredicted RBP21.31■■□□□ 1
NUP50-207ENST00000424634 HSDL1Q3SXM5 330 aa21.31■■□□□ 1
NUP50-207ENST00000424634 SESTD1Q86VW0 696 aa21.31■■□□□ 1
NUP50-207ENST00000424634 RPUSD2Q8IZ73 545 aaKnown RBP21.31■■□□□ 1
NUP50-207ENST00000424634 CCDC82Q8N4S0 544 aa21.31■■□□□ 1
NUP50-207ENST00000424634 PBX4Q9BYU1 374 aa21.31■■□□□ 1
NUP50-207ENST00000424634 SEC63Q9UGP8 760 aaKnown RBP21.31■■□□□ 1
NUP50-207ENST00000424634 HAS3O00219 553 aa21.3■■□□□ 1
NUP50-207ENST00000424634 PIK3CDO00329 1044 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms