RNA–Protein interactions for RNA: ENST00000421621.2

YKT6-202, Transcript of YKT6 v-SNARE homolog, humanhuman

TSL 1 (best)

Gene YKT6, Length 2,463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6-202ENST00000421621 C12orf60Q5U649 245 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 FOXR2Q6PJQ5 311 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 SV2BQ7L1I2 683 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 GUF1Q8N442 669 aaKnown RBP17.48■□□□□ 0.39
YKT6-202ENST00000421621 CERKQ8TCT0 537 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 BAP1Q92560 729 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 ARL8AQ96BM9 186 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 LAMB1P07942 1786 aa17.48■□□□□ 0.39
YKT6-202ENST00000421621 NKRFO15226 690 aaKnown RBP eCLIP17.47■□□□□ 0.39
YKT6-202ENST00000421621 CXCR5P32302 372 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 LETM2Q2VYF4 491 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 NUCKS1Q9H1E3 243 aaKnown RBP17.47■□□□□ 0.39
YKT6-202ENST00000421621 EHD4Q9H223 541 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 STK17AQ9UEE5 414 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
YKT6-202ENST00000421621 ZEB2O60315 1214 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 GNA11P29992 359 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 KLHDC7AQ5VTJ3 777 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 MMTAG2Q9BU76 263 aaKnown RBP17.47■□□□□ 0.39
YKT6-202ENST00000421621 LUC7LQ9NQ29 371 aaKnown RBP17.47■□□□□ 0.39
YKT6-202ENST00000421621 GDF3Q9NR23 364 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
YKT6-202ENST00000421621 COL4A1P02462 1669 aa17.47■□□□□ 0.39
YKT6-202ENST00000421621 AFF2P51816 1311 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 RBAK-RBAKDNI3L0D1 243 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 USP17L8P0C7I0 530 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 INPP5BP32019 993 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 LIG3P49916 1009 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 PAK2Q13177 524 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 EMC10Q5UCC4 262 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 MREGQ8N565 214 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 ZIM3Q96PE6 472 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 PSMB7Q99436 277 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 C6orf50Q9HD87 102 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 PRDX5P30044 214 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
YKT6-202ENST00000421621 TECP42680 631 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 CACNA2D4Q7Z3S7 1137 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 IQCKQ8N0W5 287 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 SPZ1Q9BXG8 430 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 SALL4Q9UJQ4 1053 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
YKT6-202ENST00000421621 NDUFAB1O14561 156 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 NCK2O43639 380 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 NAPAP54920 295 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 SWT1Q5T5J6 900 aaKnown RBP17.45■□□□□ 0.38
YKT6-202ENST00000421621 CFAP58Q5T655 872 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 CD302Q8IX05 232 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 C1orf131Q8NDD1 294 aaKnown RBP17.45■□□□□ 0.38
YKT6-202ENST00000421621 SYN2Q92777 582 aaPredicted RBP17.45■□□□□ 0.38
YKT6-202ENST00000421621 MTMR8Q96EF0 704 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 SMARCAL1Q9NZC9 954 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 ROBO3Q96MS0 1386 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
YKT6-202ENST00000421621 GRID2IPA4D2P6 1211 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 GNPATO15228 680 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 MRPS25P82663 173 aaKnown RBP17.45■□□□□ 0.38
YKT6-202ENST00000421621 RASSF7Q02833 373 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 KDM7AQ6ZMT4 941 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 HPS3Q969F9 1004 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 RIC8AQ9NPQ8 531 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 EHD2Q9NZN4 543 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 CASZ1Q86V15 1759 aa17.45■□□□□ 0.38
YKT6-202ENST00000421621 USP8P40818 1118 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
YKT6-202ENST00000421621 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
YKT6-202ENST00000421621 LRRC27Q9C0I9 530 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 SMCO2A6NFE2 343 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 MYMKA6NI61 221 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 KLRF2D3W0D1 207 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 SLC1A4P43007 532 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 PSMD2Q13200 908 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 SLC9C1Q4G0N8 1177 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 HGSNATQ68CP4 663 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 LRRC55Q6ZSA7 311 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 PROM2Q8N271 834 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 TSG101Q99816 390 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 BLOC1S4Q9NUP1 217 aa17.44■□□□□ 0.38
YKT6-202ENST00000421621 USP17L3A6NCW0 530 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 USP17L4A6NCW7 530 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 GLI1P08151 1106 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 NAP1L1P55209 391 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 GRB10Q13322 594 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 PDCLQ13371 301 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms